Silurus meridionalis (southern catfish): 124384853
Help
Entry
124384853 CDS
T08004
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124384853 (sntb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124384853
NCBI-ProteinID:
XP_046703776
LinkDB
All DBs
Position
4:complement(16551182..16572541)
Genome browser
AA seq
514 aa
AA seq
DB search
MAVASAASGMRVQKSGVLEVLVRERWHRVLAELSDEALALSCEDAAGSGDVNGVANGSRT
SPDSPDTGARTAGADSPERVPEAIANRKRCVRVVKQDVGGLGISIKGGKENKMPILISKI
FKGLAADQTHALYVGDAILSVNGVNLRDATHDEAVQGLKRAGRVVTLEVKYMREATPYVK
KGSPVAEIGWETPPPESPRPGNPHCEVPPSPPSLSPQGDCRFIPLKMCYVSWAMSTPDPE
NRHLELHSPDAKHTVVLRCSDSSSAQVWFESMQSATYNLMMKVTSELSAAGRNGIGASHE
IRHLGWLAEKTESERPRWKPVVVAVTDKDLMLYDSMMRLKENWPNPAHTYPLLSTRLVHS
GPDRGSPQPGGELSFATRTGTRLGIETHVFRAETCKDLSLWTRHIVTGCHTAAEMIKEVT
TSCMYKGQDCRLVIHYELGFSVLPEGEPPHGHPLFSYPFEKLRMSSDDGVRMLYLDFGGK
EGEIQLDLHSCPKPIVFILHSFLSAKISRLGLVN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcgtcggcggcttccggcatgcgcgtgcagaaaagtggcgttttggaagtg
ctggtgcgggagcgatggcaccgggtgctggccgagctgagcgacgaggcgctcgcgctg
agctgcgaggacgcggccgggagcggcgacgtgaacggcgtggcaaacgggtcgcgaacg
agccccgacagtcccgacaccggtgcgaggaccgccggggcagactcgcccgagcgcgtc
cctgaggccatcgccaacaggaagcggtgcgtaagggtcgtgaagcaggacgtgggcggc
ctgggcatcagcatcaaaggtgggaaggaaaacaagatgccgatactcatcagcaagatc
ttcaaggggctagccgcagaccagacgcacgcgctttacgtcggcgacgctatactgtcg
gtgaacggcgtgaacctgcgcgacgccacgcacgacgaggcggtacagggtttaaagaga
gccggccgtgtggtcacgctggaagtaaagtacatgagagaagccacgccgtatgtgaaa
aaggggtctccggtggcagagatcggatgggagacgcctccaccagaatctcctcgacct
ggcaacccccactgtgaggttcctcccagcccgccttcactgtcaccgcagggggactgc
agattcatcccgctgaaaatgtgctacgtctcgtgggctatgtccacccctgatcctgaa
aacaggcatttagagctacactctcccgacgcaaagcacacagtggtgttgcggtgttcg
gactccagctcagctcaagtgtggttcgagtccatgcagtctgctacctataacctcatg
atgaaagtgacgtctgagctcagcgcagctggcaggaacggaatcggggcgagtcatgag
atacgccacctcggctggctggcagagaagacggagagtgagaggccacgctggaagccg
gtggtggtcgcggtgacggacaaagacttgatgctctatgacagcatgatgcgtctgaag
gagaactggccgaacccagcacacacatatcctctactttcaacacggttggtacactct
ggtccagatagagggtctccgcagccagggggggaattatccttcgctacacgcacaggc
acgagactgggcatagagactcatgtatttcgcgctgagacttgtaaagacctgtcactg
tggaccagacacattgtcactggctgccacactgctgctgaaatgatcaaagaagtgact
accagctgcatgtataagggtcaggactgcaggctggtcattcactatgagctgggcttc
tccgtgctgcctgaaggagagcctcctcacggtcatcctctatttagctacccatttgag
aaactccgaatgtcctcagatgacggggtgcggatgctttatttggatttcggaggcaaa
gagggtgaaattcaactggacctgcactcgtgtcccaagccaattgtcttcattcttcac
tccttcctttcagcgaagatcagcagactgggtttagtgaactga
DBGET
integrated database retrieval system
