Silurus meridionalis (southern catfish): 124384856
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Entry
124384856 CDS
T08004
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124384856 (irx4a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124384856 (irx4a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
124384856
NCBI-ProteinID:
XP_046703783
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All DBs
Position
4:14752859..14762746
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AA seq
445 aa
AA seq
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MSYPQLGYPYSSAPQFLMPTNSLTSCCESRARSEAGSCAPAPPPPPPPPQAPVYCPVYES
RLLATARHELGVYSNPYASGQGYGNYVTYGTEASAFYSLGAFDAKDSAASASISQAAAAA
YYPYDPTLGQYQYDRYGSMDGSTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWAPRNKGSDEKRCVDDDEGSQEEQIKSDTNDDES
RSRDDKDLQLSDLDDFDTIESESSECDMKHQFHVNTHLNVLPEHLKETSLKLTTLEADAL
KLQSIRTSLERDTDLPKSCLKTPIRDCEYNPNGNTKICFQQDHQTLDSKPRIWSLAQTAT
SLNPTEYSSCMLRCQPAIPGSSSPPGKVQEKQQDSPVTTLRHWMDGVFHDPLFKHNNLDQ
ANNNSTPVSWSTTKSSVLDTGVQRD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccacagctcggatatccctactcctctgctccacagttcctcatgcccacc
aactctctgacgtcgtgttgcgagtcgcgtgcgcgctctgaggcaggctcgtgcgcacct
gccccgccgccccctcctcccccgccccaggctccggtttactgccccgtgtacgagagc
aggctactggccaccgcgcgccacgagctcggcgtctacagcaacccgtatgccagcggt
cagggctacggaaattacgtcacatatggcaccgaggcctcggcgttttactctctgggt
gcattcgatgcaaaagacagcgcagcatctgcgagcataagccaggctgcagctgctgct
tactacccctatgatcccactctggggcagtaccagtatgacagatatggctcgatggat
ggaagcacaaggagaaagaatgccacacgtgagaccactagcactttgaaggcctggcta
caggagcaccgcaagaacccataccccaccaagggtgagaagatcatgctggccattata
accaagatgacgctcacacaggtgtctacgtggtttgccaatgccagacgaagactcaag
aaggagaacaagatgacatgggcaccgaggaacaagggctctgatgagaaaagatgcgtt
gatgatgatgaaggctcacaggaggagcagatcaaaagcgacaccaacgatgacgagagt
cgaagtcgagacgataaggatcttcagctgagcgacctagatgattttgacaccatcgag
tccgagagctcagaatgcgacatgaagcatcagttccatgtaaacacacacctgaatgtg
ctacctgaacacctcaaagagacttccctaaagttaaccactttagaagcggatgcttta
aagttacagtcgattagaacctcgctggaaagagacactgatttgcccaaaagctgcctg
aaaactccaattcgagactgcgagtacaatcccaatgggaataccaaaatctgtttccag
caagaccaccaaactcttgatagcaagccaaggatttggtcattggcccaaaccgccacc
tcgttaaaccccactgagtattcctcatgcatgcttcgatgtcagccagctatccctggg
tcatcttcaccacctgggaaagttcaggagaagcaacaggactcaccggtcaccacattg
agacactggatggatggtgttttccatgatcccttgttcaaacacaacaatttggaccaa
gcaaacaacaatagcacgcctgtttcttggagcacaaccaaaagctcagtcctggacacc
ggagtacaacgagattaa
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