Silurus meridionalis (southern catfish): 124385003
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Entry
124385003 CDS
T08004
Symbol
nrros
Name
(RefSeq) transforming growth factor beta activator LRRC33
KO
K26317
transforming growth factor beta activator LRRC33
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124385003 (nrros)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_NXF1-5
Pou
Motif
Other DBs
NCBI-GeneID:
124385003
NCBI-ProteinID:
XP_046704003
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Position
4:complement(8445994..8449919)
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AA seq
679 aa
AA seq
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MPGIRVFLYFGLVAVLPVLCYPHTPCTLTQKTAICNNLQLSSVPSNLPQQIEELFLNQNI
ISKLQNGCLSSYPFLRTLSCANCYLKAVDVQVFSRSHWIETLNFASNELHNDYKLLSQAL
GLLTNLRFLDFSANGLTEDMVSELLHNLTSLEFLDLSRNALLRLDEYTFQDLHQLKELNL
ERNNLFEIDGAFDKLKKLRRLNLAFNSLPCLVKFDMTQLVVLNASHNLIEWFITNQDITD
TFELETLDLTDNRLLYFPFLPTYNRIKTLLLPNNHIGFYSHLSQNTSLNWTNTIEFYNLG
GNASNVTAELWNDDLYGDISSVEFLDLSVNQVRYFPQGFLQKMPHLYWLRMRSNCLESLN
LTGDYLPVTVYELDVSNNRLTELHAHSSSVSELNNLTHLNLSLNNIQKLPPRLFTTLPRL
SFVDLSYNTVGMCHPKELPNLNSSACALWTPLPSLKQLHIAGCNLINIPPSAFDGTQLTH
LDLSHNPDLHFSQDCLSGLSGTLQHLGLSNTGLQDFNFSPFRQLKSLNISKNSISELPAS
LMTLNLKLLDLRDNRLPTIKPEHATVLAKRVQIVYMNGNYFNCCQLEWYRTFEESKILHV
ADLLEITCVDLHQQRKKAGVFDSVLCGGKSREESIFWYILLFLSVGVSMVGVSVIYFLTF
RPRLLPRVIKKKCWKPTTY
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcattagagtctttctctactttggcttggtggctgttctaccagttctttgc
tatcctcacaccccctgcacactgactcaaaagacggctatatgtaacaacctccaactc
tcttctgttcccagcaacttgccacagcaaatagaagagctttttttaaatcagaacatt
atttcaaaattacagaacggatgtctctcaagctatcctttccttcgcacattgagctgt
gcaaactgttatttaaaagccgtagatgtgcaagtgttctccaggtcacattggatagag
accctcaattttgccagcaatgaacttcacaacgactacaagctgctttcccaggctctt
ggtttgttgaccaatttgcgatttctggatttttctgccaatgggctcacagaggacatg
gtttctgagctcttacataatctcacatcgcttgagttcctagatttgtcgaggaatgct
cttctgcgattggacgagtacacatttcaagatcttcatcaactcaaagaactgaatcta
gaaaggaataacttgtttgagattgatggggcatttgacaagttaaaaaagctcaggcgg
cttaatctggcattcaattctttgccatgcctcgtgaaatttgatatgacccagttagtg
gtacttaatgccagtcacaatctcattgaatggttcataacgaatcaggacatcacagac
acctttgagctggagacgctggacttgactgataatcggctcctgtattttccattcctt
ccaacctacaatcgcattaaaacgctgttattacccaataaccatattggcttttacagt
catctctcacagaatacctctttaaactggaccaataccattgagttctacaatttgggt
ggaaatgccagcaatgttacagcagaactttggaacgatgacctttatggagatatatct
tctgtggaatttctggatctcagtgttaatcaggtgagatacttccctcagggatttctt
cagaaaatgcctcatctttactggcttagaatgaggagcaactgcttagaatcactgaat
ctaacaggagactatcttcctgtaacagtatatgagctggatgtgagcaacaacagactc
actgaactgcatgcacactccagctcagtcagtgaactgaataaccttacacatttgaac
ctgagtttaaacaacatacagaagcttcctcctcgactgttcactactttaccccggctc
agcttcgtggacctcagttataacacagtgggaatgtgtcatcccaaagagctacccaac
ttaaactcatcagcctgtgctctttggacacctttgccctcattaaaacagctccacatt
gctgggtgcaacttaatcaatattccaccatcagcgttcgatggcacgcaactaacacat
cttgacctatcccacaacccagacctgcactttagccaagactgtttatcaggtctcagt
gggactctacagcacctaggcctgagcaacacaggtttgcaggactttaacttttctcca
tttagacagttaaaatctttgaacatctccaaaaactccatatcagagcttcctgcatct
ctaatgacactgaacttaaagctcctggacttgagggacaacaggttgcccacgattaaa
ccagaacatgccactgtgctagctaaacgagtgcagattgtttatatgaatgggaactat
ttcaattgctgccagttagagtggtacaggacatttgaagagtccaaaatcctccatgtt
gctgatcttttagagatcacatgtgtagacctacaccagcagagaaaaaaagctggtgtt
tttgattctgtcctttgtgggggtaaaagcagagaggagtctattttctggtacattttg
ttatttttatctgttggtgtgtccatggtgggtgtctctgtcatttatttcctgactttc
agaccaagactactgccacgtgtaattaagaagaaatgctggaagcctacaacatattaa
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