Silurus meridionalis (southern catfish): 124385014
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Entry
124385014 CDS
T08004
Symbol
dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
smeo04814
Motor proteins
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124385014 (dync1i1)
09142 Cell motility
04814 Motor proteins
124385014 (dync1i1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124385014 (dync1i1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124385014 (dync1i1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124385014 (dync1i1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
124385014 (dync1i1)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
124385014 (dync1i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD40_RFWD3
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
124385014
NCBI-ProteinID:
XP_046704017
LinkDB
All DBs
Position
4:complement(8793400..8811576)
Genome browser
AA seq
619 aa
AA seq
DB search
MCDTRKIKAKLEHTKQLVAEMHEQKRQKEEERRKKESEAQLIAESASEDSDTKRSEISQE
LPLEQPLHLLTWDTCYFHYLVPPPMSPSSQSVSASSENGSQKSVEGGTMARMLQWDMDPS
ALQLLADAEHRMQRLEASEMVQINYMPKELVTYCKETQTTFTTNQIYNQKDEVKNEELPA
VKPDPEVHLVEDNQESMKDNEHPKELTGEERQQIVHSEDFLIFFDRSIRLVDRALAEDLD
IFFDYSGRDMEDKEGETQAGFNLSFNRQFYNEQWSKHRVVTCLDWSLQHPESLMASYNAN
EHAPQEPDGVVLVWNMKFKKTIPEYIFHCQSSVMSVGFAQFHPNLIVGGTYSGQVVLWDN
RSHRKTPVQRTPLSAAAHTHPVSSINVVGTQNANNLVTVSTDGKMCFWSLDMLSKPQDSM
ELYYNKSKVIAVTGIGFPVGEVNNFVVGSTEGTVYAASRHGIKAGINKMFKGHQGPVTGI
SCHNAVGPIDFSNLFTTSSFDWTVKLWSTKHNKPLYSFEDNVDYVYDVMWSPMHPAVFAT
VDGLGRLDIWNLNKNTEVPTASVTVDSSCALNRVRWASGGHEVAAGDSEGRVWIYDVGEQ
LAVPHSEDWSQLARFLVEF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacacacgcaaaataaaagccaaactggagcacacaaaacagcttgttgctgag
atgcatgagcaaaaaagacaaaaagaagaagagagaagaaagaaagagtctgaggcacag
ctaatagcagagagtgcatcagaagactcggatacaaagagaagtgagatctctcaagaa
cttcctttagagcaacctctccatcttttaacatgggatacctgttattttcattattta
gtcccaccccctatgtctccctcttcacaatcagtgagcgcttccagtgaaaatgggagc
cagaagtcagtggagggaggaaccatggctaggatgcttcagtgggatatggacccctca
gctcttcagctcttagcagacgcggagcacagaatgcagagacttgaagcatcagaaatg
gtgcagattaattacatgcccaaagaactggtgacttactgtaaagagacccagactact
tttacaacaaatcaaatatacaatcaaaaagacgaggtgaagaatgaagaacttcctgcg
gtcaaacctgatcctgaagtgcatttggtagaggacaatcaggagtcaatgaaagataat
gaacatcctaaggagctcacaggggaagagaggcagcaaattgttcactctgaggatttc
ctgatcttctttgaccgcagcattcgattggtggaccgagcactagctgaggacttggat
attttctttgactatagtggacgtgacatggaagacaaagagggagaaacacaagctgga
ttcaatctgtccttcaatcgtcagttttataatgagcagtggtcaaaacatcgagttgtc
acttgtctggattggtcattgcagcacccagaatcgcttatggcttcatacaatgccaac
gagcatgcaccacaggagccagatggagttgtgctggtgtggaacatgaagtttaagaag
acaatcccagaatacatattccattgtcagtcctctgtgatgtcagtgggtttcgcacag
tttcatccaaacctcattgtcgggggcacttactctggccaggtagtattgtgggacaat
cggagccacagaaaaactccagtacaaaggacacctttatctgctgctgctcatactcac
cctgtgtccagcataaatgtggtgggaacccaaaatgctaacaacctggtcacagtgtct
acagatggcaagatgtgcttctggagtttagatatgctatccaagccacaggacagtatg
gaactatattataacaagtctaaagtaattgctgtgactggcataggttttcctgttggc
gaagttaataactttgttgtgggaagtacagaagggacggtgtacgcggcctctcggcat
ggcattaaggctggaataaataagatgtttaagggccaccaggggccagtcactggcatt
agctgccacaatgctgtgggccccattgatttctccaacctttttacaacctcatccttt
gactggactgtgaaactgtggtcaaccaaacacaataaaccactctactcttttgaagac
aatgttgactatgtctatgacgtcatgtggtctcccatgcacccggctgtctttgctaca
gtggatggactgggtcgcttggatatctggaaccttaataagaacacagaagttcctacg
gcgagtgtgacagtggatagctcttgtgcgctgaaccgggtcagatgggcatcagggggc
catgaagtagcagcaggcgattctgagggtcgagtctggatctatgatgttggagagcaa
ttggcagtgccacattcagaagactggagccaacttgcacgatttcttgtggagttctga
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