Silurus meridionalis (southern catfish): 124385029
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Entry
124385029 CDS
T08004
Symbol
tgfb2
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04068
FoxO signaling pathway
smeo04110
Cell cycle
smeo04218
Cellular senescence
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124385029 (tgfb2)
04350 TGF-beta signaling pathway
124385029 (tgfb2)
04068 FoxO signaling pathway
124385029 (tgfb2)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124385029 (tgfb2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124385029 (tgfb2)
04218 Cellular senescence
124385029 (tgfb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124385029 (tgfb2)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124385029 (tgfb2)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Transforming growth factors (RSTK binding)
124385029 (tgfb2)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Growth factors/receptors
124385029 (tgfb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
Beta-prop_RIG_2nd
SPEG_u2
Motif
Other DBs
NCBI-GeneID:
124385029
NCBI-ProteinID:
XP_046704042
LinkDB
All DBs
Position
4:25328085..25351956
Genome browser
AA seq
401 aa
AA seq
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MNLFVVSFLLSLDLVAVALGLSTCSTLDMDQFMKKRIEAIRGQILSKLKLSKPPEEFPEP
EDVSRDIIAIYNSTRDLLQEKANERAATCERQRSEEEYYAKEVHKIDMQPFYPSENVIPP
TYYNPYFRRLRFDVSSMEKNASNLVKAELRIFRLQNPKARVSEQRVELYQILGHKDLTSP
TQRYIDSKVVRTRTEGEWLSFDVTEAVSEWLLHRDRNNGFKISLHCPCCTFVPSNNYIIP
NKSEELEARFAGIDDSFIRRHSGQSPHLLLMLLPSYRLESQHKSHRQKRALDAAFCSRNV
QDNCCLRSLYIDFKKDLGWRWIHEPKGYNANFCAGACPYLWSADTQHTKVLGLYNTINPE
ASASPCCVSQDLEPLTILYFIGKTPKIEQLSNMIVKSCKCS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctttgtagtgagctttctcctaagcctggatctagtggccgtggcgctcggc
ttgtccacgtgcagcactttggacatggatcagttcatgaaaaagcgcatcgaggcgatc
cgaggccagatcctaagcaagctgaagctcagtaagccgccggaggagttccctgagccc
gaagacgtgtcccgggatatcatcgccatctacaatagcacccgcgacctgctgcaggag
aaggccaacgagcgcgccgccacctgcgagcgccagcgcagcgaggaggagtactacgcc
aaggaggtgcacaaaatcgacatgcagcctttctacccctctgaaaatgtcatccctccg
acctactacaatccctatttcaggcggttaaggtttgacgtgagctccatggagaagaac
gcctccaacctggtaaaggctgagctgaggattttcaggctacagaacccaaaggctcgt
gtgtctgagcaacgcgttgagctttatcagatccttggccacaaggacctcacgtcaccc
acacagcgctacattgacagtaaagtggtgcgcactcgtacagagggagagtggctgtct
tttgacgttaccgaagcggtcagcgaatggctactgcacagagacagaaacaatggattc
aagatcagcctgcactgtccttgctgcacttttgtgccatcaaataattacatcatccca
aacaagagtgaagagctggaggcccgctttgcagggattgatgatagcttcatccgccgt
cacagtggccagtctccacacttgctgctcatgttgcttccatcctaccgcctggagtcc
cagcacaagagccacagacagaaacgagccctggatgctgctttctgctccaggaacgtc
caggacaactgctgtctgcgctcactatacattgacttcaaaaaggacctgggatggagg
tggatccatgagccgaaaggatacaatgccaacttctgtgctggagcatgtccttatcta
tggagcgcagacacccaacacactaaggtccttggtctatataacaccattaatccagaa
gcatcagcttctccttgctgtgtgtcccaagacctggaacctcttaccatcctttacttc
attggcaagacccctaaaattgagcagctttccaatatgattgtaaagtcctgcaaatgc
agctag
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