Silurus meridionalis (southern catfish): 124385046
Help
Entry
124385046 CDS
T08004
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124385046 (tcea3)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124385046 (tcea3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
124385046
NCBI-ProteinID:
XP_046704073
LinkDB
All DBs
Position
4:complement(24779770..24791285)
Genome browser
AA seq
667 aa
AA seq
DB search
MNKCGTTGKNWTKYFACKYFLTFGNFVQEGALDLLRELQKFDMTLKLLQDTRIGMSVNGI
RKHCSDEDVVSLAKILIKNWKRLLESSHSQKAERPNEIKNGSTANTQSPSGPSPDAESSP
KSSLNSPKKPVDKHRKVKNDAVFKKERHVSDHKKEKADSNHTKERERMNVMDSSVSSSAS
PLHHHKCSSLEVKKDRREAPDPHSLPQLLHLHHSLPAHIHKHQPEVKRDRRVTPETLTSQ
HSQSHHSSSNKRPSLEVPKERKKTSDPNAPLPPLPLHLHPPAQKQCALEMKKLRKQPVNP
DASLPALPLHLHPSTLTKRPPLDMQKEKEKEAKDKERKDMPAPKRSAQQLISEHQKHSRD
LGESKPAKRLSTDMKKERMDSSSFSQQPLKKPINDTKKERKDSTDSKSIQRQQSSDSKPQ
RRDSVNPKSGSSPLPKKLSEERREAHVPKLTLPGAIQRKVSTDSNDERKSKPETPKTPST
PTTPLSPSFSPAGGPLSPHLLTGDSVRDKCIEMLSAALRTDDDYKYYGANCDAMAAEIED
HIYQEIKAKDMKYKNRVRSRISNLKDPKNPNLRKNVLGGAIELSRIASMSAEEMASDELK
QLRNILTQEAIREHQMAKTSGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNEC
GNRWKFC
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatgtggaactacaggcaaaaactggactaagtattttgcttgcaagtatttt
ttgacttttggaaactttgtgcaggaaggcgctcttgacctgttgagagaattgcaaaaa
tttgatatgaccctaaagttgcttcaggacacaagaattggtatgtctgtcaatggaata
agaaaacactgcagtgatgaagatgtcgtctcccttgcgaagatcctgatcaaaaactgg
aagaggctattagaatcgagccattcccagaaggctgaaagaccaaacgagatcaaaaat
gggagcacggccaatacacagtcacccagtggaccttctccagatgcagagtcaagtccg
aaatctagtttaaactctcccaagaaacctgttgataagcacagaaaggtgaaaaatgat
gcagtgtttaagaaagaaagacatgtaagtgaccacaaaaaggaaaaagctgacagtaat
cacacaaaggagagggagaggatgaatgttatggattcaagtgtatcttcctctgcttca
ccactccatcatcacaagtgctcatctttggaagtgaagaaagacaggagagaggctccc
gatccccacagtcttcctcaacttcttcaccttcaccattctcttcctgctcatattcat
aaacaccagcctgaggtgaagagagacaggagagtcacaccagaaactttgacctctcaa
cattctcagtctcatcattcctcttctaataaaaggccatctctagaagttcctaaagag
agaaaaaagacttcagatccaaatgccccactgcctcctttacctcttcatctgcatcct
cctgctcagaaacagtgtgctttagagatgaagaaactgaggaaacagcctgtgaatcct
gatgcttctcttcctgctcttcctctccaccttcatccctctactcttacaaagcgtcct
cccttagacatgcagaaagagaaagaaaaagaagccaaagacaaagaaagaaaagacatg
ccagcaccaaaacgaagtgcacaacagctgatatctgaacatcagaaacacagcagagat
ctgggggagagtaaaccagccaaaagactgtctacagacatgaagaaagaaagaatggat
tcgtcaagttttagtcaacaacctctgaaaaagccgattaacgacacaaagaaagaaaga
aaagactccaccgattctaagtctatccagaggcagcaatcaagtgactctaaacctcag
agaagggactcagttaacccaaagtcaggaagctcacccctgcctaagaagctctctgag
gaaaggagagaagctcatgttcctaagttgactctaccaggagccatacagagaaaggtg
tccacagacagtaatgatgaacgaaaaagtaaacctgagactccaaagacaccaagcacc
cctaccacccctctgtccccttcatttagccctgctggtggtcctctgtcccctcacctg
cttactggggactccgttagggacaagtgcatcgaaatgctgtcagctgcactacgcaca
gatgatgactacaaatattatggagcaaactgtgatgccatggcagctgaaattgaagat
catatctaccaggagattaaagccaaagatatgaaatataaaaacagagtgcgtagccgc
atcagcaacctgaaagatccgaagaatccaaatttacgcaaaaatgtcctgggaggcgct
attgagctgagtcgcatagcctccatgtctgctgaggaaatggccagtgatgagctgaag
cagctgaggaacattctgactcaagaagccatccgcgagcaccagatggccaaaacctca
ggcacgactactgacctgctgcagtgtggcaaatgcaagaaaaagaattgcacatacaac
caggtgcaaactcggagtgctgatgagccgatgaccacattcgtattgtgcaatgagtgt
ggaaaccgctggaagttttgctga
DBGET
integrated database retrieval system
