Silurus meridionalis (southern catfish): 124385059
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Entry
124385059 CDS
T08004
Symbol
rbm12bb
Name
(RefSeq) RNA binding motif protein 12Bb
KO
K24526
RNA-binding protein 12
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124385059 (rbm12bb)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124385059 (rbm12bb)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CCD
Motif
Other DBs
NCBI-GeneID:
124385059
NCBI-ProteinID:
XP_046704106
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Position
4:complement(16809616..16814827)
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AA seq
629 aa
AA seq
DB search
MAVVIRLQGLRITAGSEDIRNFFTGLKIPDGGVHIIGGELGEAFIIFASDEDARRAMSRS
GGCIKGSPVNLLLSSRSEMQKVLEESTRKSETVNRRNYKEVVKRPGVKGGPPSPNEDIQV
DMRRGDNQNMGIRPLLAFPNDSRSQRKERTKDSIYLYLSGMPFSAAKEDVRVFFEGLQID
DLIFMRNNYGMFNGCCLVKFRTREDTIEGLKKDREYIGPRYIRVMPASEHQWVKSGGSVN
PEGTSPRRHVSSRSKSRSPIRHRSHSPSNEEFGVLYENLSYSVEKRDIKALLHPVSLTDD
QISIVVDNHSNRSKSAIVVFKNLKDYCSGLAHHKETFLHSVIYASPVSKEKIATIFESTQ
YPRKDHRSSSKSSEHSQKSVYDSERRCIYVRNLPFDVRKVEIMDFFHGFQLAEDRLFLLH
DERGAGLGEALVVFQTETEAMMAQSLNGRRFLGSEVMLKCITLTQMQEFGIENSSKPEKK
SPSKSPRYSGEQNFLNDGMYQDNYDMMPDTQHYGPGKSGLLDDFENPDAYGQGPCASDVQ
QYGPSDQLFNQPTCVRLLNLPSKIRDDEIYDFCYGYRVIPGSVSLQYNRFGAPTGTATVV
FESHSEAVTAVQELDGRPIGTRKINVVFV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggtcatccgcttacagggacttagaatcacagctggttcagaggacattcgc
aatttcttcactggccttaaaatccccgatggtggggttcatataattggcggcgaactc
ggggaagcgttcataatttttgcatctgatgaagatgcaagacgggcgatgagtcgctca
ggaggatgcattaaaggctctcctgtcaacttgcttttgagtagcaggtcagagatgcag
aaggtcctcgaggaaagcacaagaaaatctgaaacggttaacaggagaaattacaaggag
gttgtcaaaagaccaggagtcaaaggaggacccccgtcaccaaacgaggacattcaagta
gatatgcgaagaggagataatcaaaacatgggaattagacctcttctagcttttcctaat
gactctcggtctcagaggaaagaaagaactaaagatagcatctacttgtacttgtctgga
atgccattctcagcagcgaaggaggatgttcgtgtcttttttgaaggtttgcaaatcgat
gacctaattttcatgcgaaacaattatggaatgtttaatggttgttgtttggtcaagttc
agaaccagagaggataccattgaaggtctgaagaaggatcgggaatacattgggccacgg
tacattagagtaatgccggcttcggagcatcagtgggtcaaatcagggggttcagttaat
ccagaagggacaagtccgagaagacacgtctcatcgcgctcaaaatctcgctctcctatt
cgccatcggtctcattccccttccaatgaagagtttggtgtgttgtatgaaaacctctca
tattcagttgaaaagcgagatataaaagccttactccatcccgtgtctttgacagacgac
cagatcagtattgttgttgataaccatagtaacaggagcaaatcagctattgtggtgttc
aagaatctaaaggattattgttctggcctggctcaccataaggagacctttttgcacagt
gttatttatgcgtctcctgtctccaaagaaaagattgccactatatttgagtctactcag
tacccaagaaaagaccacagaagttccagcaaatcatctgagcattcacaaaagagtgtg
tatgactctgaaagacgatgcatatatgttcgcaacctgcctttcgatgtccggaaagta
gagatcatggacttcttccatggattccagcttgcagaagacaggcttttcctgctccat
gatgagcgaggagccggacttggggaggcgttagtggtttttcagacagaaacggaggca
atgatggcccagtctctgaacgggcgaagatttcttggatcggaggtcatgctgaaatgc
atcaccttgactcagatgcaagaatttggtattgaaaacagcagcaaacccgagaagaaa
tctccgagcaaatcgccaagatacagcggtgagcagaatttccttaatgacggaatgtat
caggacaattatgacatgatgccagatacccaacactatggtcctggaaagagtggtcta
ttggatgattttgaaaacccagatgcttatggacaggggccctgtgcttctgacgtacaa
cagtatggaccatctgaccaactatttaatcagcctacttgcgtccggttgctcaatcta
ccatctaagataagggatgatgaaatctatgacttctgctacgggtacagagtaattcca
gggtcggtctcattgcagtataataggtttggagcacctacaggtactgcaactgttgtg
tttgaaagccacagtgaggcagtcactgctgtccaagaattagatggaagacccattggt
acaaggaaaattaatgttgtgtttgtgtaa
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