Silurus meridionalis (southern catfish): 124385072
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Entry
124385072 CDS
T08004
Symbol
yme1l1a
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1 isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124385072 (yme1l1a)
Peptidases and inhibitors [BR:
smeo01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
124385072 (yme1l1a)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
RuvB_N
TIP49
DUF815
Mg_chelatase
IstB_IS21
nSTAND3
AAA_lid_PRS2_C
AAA_7
AAA_33
AAA_17
AAA_14
AAA_28
Zeta_toxin
PhoH
ABC_tran
AAA_18
Motif
Other DBs
NCBI-GeneID:
124385072
NCBI-ProteinID:
XP_046704126
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Position
4:complement(22303257..22313999)
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AA seq
734 aa
AA seq
DB search
MFSLTTSFQPQVTVPLSHIINALHSLKASASSTATAAVQSLHRELSADQHTLPHTPDAQL
KQIPKDLGISELRLSGVNELLKRLLPKVAPTESPDLRVCLQSSTWRTSHISTDSFFHNKH
GFSPRIPGIFGYPLFQRQNSHPLQVVCSDLQHLQAWVQTRGFKTLRTKSRRLQSSYESPA
ETESYSPPFMKGLLMRDKADTGSLDQLITQRNLPENQQDAFKTGFAEGFMKSQTLMQKTQ
DSLKRTRLILLVLLLVGIYGLSRTPYLSGKGSFSDTVRFRSTSGMDSALDPIQIKNVTFE
HVKGVEEAKSELQDIVEFLRNPQKFTALGGKLPKGVLLVGPPGTGKTLLARAVAGEADVP
FYYASGSEFDEMFVGVGASRIRNLFKEAKANAPCVIFIDELDSVGGKRIESPMHPYSRQT
INQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTIPRPDVKGRTEILNWY
LKKIKVDPDLNAEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTIKELEFAKDKILM
GPERKSAKIDKKNKTITAYHESGHAIVAYYTKDAMPINKATIMPRGPTLGHVSMLPETDR
WSETRAQLLAQMDVSMGGRVAEELIFGDENITTGASSDFDGATKIAKMMVTRFGMSDKLG
VMTYSDLSKHSQETQAAVDNEVRVLLQDSYERAKKLLKTYSKEHAKLADALLTYETLDAK
EIQLVLEGKSLEPR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctcaccacgtctttccagcctcaggtaactgtgccactgagccatattatc
aatgctttgcactcgctgaaagcatcagccagctccactgccacagcggcagttcagagt
ctacaccgtgagctttcagctgatcagcacacactgcctcacacccctgatgcacagctt
aagcaaatccctaaagacctggggatctccgagctgaggctaagtggagtcaatgagctg
ttaaagaggttgctgcccaaagtagctcccacagagagcccagacctaagagtctgtctt
cagtcttcaacatggagaacatcacacatctccacagattctttttttcacaacaaacat
ggtttctctccgagaataccaggaatctttggctatccactctttcaaagacaaaactcc
catcctcttcaggttgtttgctcagatcttcagcacctgcaagcatgggtccaaactcga
ggtttcaaaacactaaggaccaaaagtagacgccttcagtccagctatgagagtccagca
gaaacggaaagctatagcccaccattcatgaagggtcttctcatgagggataaagctgat
actgggagccttgaccagttaataacacagaggaatcttccagagaatcagcaagatgcc
tttaagactggttttgcagagggtttcatgaaatctcaaaccctgatgcagaagacacaa
gattcacttaagaggactcgtttgattttgcttgtccttttacttgttggcatctatggt
ttgtcaagaaccccatatctctcgggtaaaggctccttttctgatactgtccgattccgt
tctacgtctggcatggattctgcactggatccaattcaaataaagaatgtcacctttgag
catgttaaaggtgtggaggaggcaaagagtgagcttcaagacattgttgagttcttgagg
aatcctcagaaattcactgcccttggtggaaagctacctaaaggtgtcctcctggtcggt
cctcctggaactggaaaaactctgcttgccagagctgtggcaggcgaggcagatgtgcca
ttctactatgcgtcagggtcagagtttgatgagatgtttgtgggtgttggagcaagtcgc
atcaggaacctatttaaagaagcaaaagctaacgccccatgtgtgatctttattgatgag
ttggacagtgttggtggaaagcggatagagtcaccaatgcatccatattcacgtcagacc
atcaatcagcttcttgcagaaatggatgggtttaaaccaaatgaaggagttattgttatc
ggggcaacaaattttgcagaagctttggacaatgctcttgtgagacctgggaggtttgac
atgcaagtcacaatccccagacctgacgtgaaaggacgcactgagatcctcaactggtac
ttaaagaaaatcaaagtggaccctgatttgaatgcagaaattattgccaggggaacggtg
ggcttctcaggagcagaactggagaacttggtgaatcaggcagcactaaaggctgctgta
gatggaaaggagatggtgacaataaaggaactagaattcgctaaagacaagatcctcatg
ggcccagaacgcaaaagtgcaaagattgacaagaagaataaaacaatcacggcatatcat
gaatctggacatgcaattgtggcatattacacaaaagatgccatgcccataaataaagct
actatcatgccgcgaggacccacacttggtcatgtgtctatgcttccagagaccgatcgc
tggagtgagactcgtgctcagctgttggctcagatggatgtcagtatgggcggcagagtg
gcagaagagctcatttttggggatgaaaacatcactactggagcatcaagtgattttgat
ggcgcaactaagattgcaaagatgatggttacacgctttggaatgagtgacaagcttggt
gtcatgacctactcagacctgtccaaacatagccaagaaacacaagctgctgttgacaat
gaagtcagagtgctgctacaggattcatatgaacgtgctaagaaactcctcaagacatac
agcaaggagcacgcaaaactggcagatgctctgctcacctatgagactctggatgcaaaa
gaaatacagttggttctagagggcaaatctctagagcccagatga
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