Silurus meridionalis (southern catfish): 124385119
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Entry
124385119 CDS
T08004
Symbol
ssr1
Name
(RefSeq) translocon-associated protein subunit alpha isoform X1
KO
K13249
translocon-associated protein subunit alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124385119 (ssr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124385119 (ssr1)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
124385119 (ssr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAP_alpha
Nop14
Piezo_TM1-24
DMAC1_Dmo2
Motif
Other DBs
NCBI-GeneID:
124385119
NCBI-ProteinID:
XP_046704210
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All DBs
Position
4:28432697..28439159
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AA seq
334 aa
AA seq
DB search
MRDSHNAHAQKTRVLVRQQVKSRSCACFRLLLLDSAKMLKFLPKFLLLLLLAFPVTILMK
GTFVAAQDVTEEEEAADEDTTDDVIAEDEDDEAEVEDDENTELTEEKDEEEEEEALAGEI
KPSPNADTTILFVKGEDFPANNIVKFLMGFTNKGSENFVVESLDASFRYPQDFQFYIQNF
TALQLGIEVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDSSGNIFQDAVFNQTVTIT
EREDGLDGETIFMYVFLSGLGLLVVVGLHQLLESRKRRRPVAKVEMGTSNHNDVDMSWIP
QETLNQIMQSRRDKASPRRSPRKRTQKRSAGSDE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgattctcacaacgcgcatgcgcagaagacgcgcgttctcgttcggcagcaggta
aagagcaggagctgcgcgtgttttcgcttgttgctgttggactccgccaaaatgctcaaa
ttccttccgaaattcttgctcttgctgttgctagcattcccggtaaccattttaatgaaa
ggtacgtttgtagctgcacaggatgttacagaagaagaagaggcagccgatgaagatact
actgatgatgtgattgctgaagatgaggatgatgaagcagaagtggaagatgatgaaaac
acagaattgactgaagaaaaagatgaagaggaagaagaagaagctctagcaggagaaata
aagccttccccaaatgctgatacaacaattctgtttgtcaaaggagaagacttcccagcc
aacaacattgtgaaattcctgatgggcttcactaataaaggcagtgagaattttgtggtc
gagtctctggatgcttccttccgctaccctcaagactttcagttttacatccagaacttc
actgctctgcagttgggtatagaggtacctccacagcgccaggccacgtttgagtactct
ttcatccctgctgagcccatgggtggtcgtccttttggcttggtcatcaacctcaactac
aaggacagcagtggcaacattttccaggatgcagtgtttaaccagacagtcaccatcact
gagagggaggatggtttggatggagaaacgatcttcatgtacgtgtttctctctggcctt
ggacttctggtggttgttggcctgcatcagctactggaatctaggaagaggaggagacct
gtggccaaggtggagatggggacctccaaccataatgatgttgatatgagctggatccct
caggaaacactcaatcagattatgcagagtcggcgagataaggcttcccccagaagatca
ccccgtaagaggacgcagaagcgctctgctggatcagatgagtga
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