Silurus meridionalis (southern catfish): 124385203
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Entry
124385203 CDS
T08004
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124385203
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
124385203
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RuvA_C
Motif
Other DBs
NCBI-GeneID:
124385203
NCBI-ProteinID:
XP_046704335
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All DBs
Position
4:complement(23222620..23228950)
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AA seq
601 aa
AA seq
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MQPACHHGISELQLKVDFFRKLGYSPQEVQAALLKLGLDTDTNAVLGELVRSGARDSPTA
NQESEDGSSGFSHRGGGGSSSKDLFRDIQRSPALEEFDSNLKPIVIDGSNVAMSHGNKEV
FSCHGIELAVNYFLERGHRNITVFVPSWRKEQPRPDVPISDQHILAELEKRKIVVFTPSR
RVGGKRVVCYDDRFIVKLAYELDGIIVSNDTYRDLQSERPEWKHCIEEGLLMYSFVNDKF
MPPDDPLGRHGPYLDNFLRKKPLLPDTKRQLCPYGKKCTYGIKCKFYHPERTSQSQRSLA
DELRDNARLSSSVHYCSEERRRSGVSQRGSSHTESGFSSYFPSLERELEYKLTLEPSVRI
PRDQLTESLHHYWDDVPTKYPACNTPLDWQSLYNPYLTNPLSSSDSGLGSYESQFSDASR
GHDDSYKISSRHNNRFYEQPDVPFACTCSSEPVVQPSIHQYPLSQHPHNCFDYGALQFRR
PSSNQPYSLPNYAQPNGLHHSQPKACSDTVWLPQTRTAVSLPNPLHSVGPHRSNDGYGGS
QGGVHPSTVPFEVEREETRKKLHAIFNPYHVDKVMGMFPKLKDAQKLAAEILKLKSKGEL
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgcttgccatcatggcatctcggagctccagctgaaggtggactttttccgt
aagctgggatattcaccgcaggaggtacaagcagccctgctgaaactaggcttggacact
gatacgaatgccgtacttggagaactggtgcgctccggagccagagactcaccgacagca
aaccaggagagtgaagatggaagctctggatttagccaccgtggaggaggtggatccagc
agtaaagatctcttcagggatattcagagatccccagcattagaagagtttgacagcaat
ctcaaacccattgtgattgatggaagcaatgtggctatgagtcatgggaacaaggaagtt
ttttcatgtcatggaattgagctggcagttaactacttccttgagagaggacacaggaac
attactgtttttgtgccctcatggcgaaaagagcaacccagaccagatgtcccaatttca
gatcagcacattcttgcagagctcgaaaagagaaagatagttgtattcactccatccagg
cgggtaggaggaaagcgagtggtctgctatgatgatcgattcatcgttaaacttgcttat
gaactggatggcattattgtatctaacgacacataccgtgaccttcagagtgaacggcct
gaatggaagcactgcattgaggaggggctactcatgtactcctttgtcaatgacaagttt
atgccaccagatgaccctcttggtcgccatggcccatacctggataatttccttagaaag
aaacctctgctaccagacaccaagcgccagctttgtccttatggaaagaaatgcacatac
ggaatcaaatgcaagttttatcaccctgaacgtacaagccagtcacaacgttctcttgca
gatgaactaagggacaatgcccgtctgtccagttctgtccactactgttcagaagagaga
cgaagatcaggagtttcccagagagggtccagccacacagagtctggcttcagttcatac
tttccctcattagagcgagagctggagtacaagctaactttggaaccttctgttcgtata
ccaagagaccaactcactgaaagcctgcaccactactgggatgatgtccctaccaagtac
ccagcctgtaacactcctctggactggcaaagtctgtacaacccatacctcactaatcct
ttatctagctcagattctggccttggctcctatgagagtcagttttcagatgcatctcga
ggacatgatgattcctacaagattagttctaggcataataataggttttatgagcagcca
gatgtgccttttgcttgcacttgctcttctgagccagttgtccaaccaagcatccatcag
taccctctttcccagcaccctcacaactgctttgattatggtgcactccagttccgtagg
ccctctagcaatcaaccctacagccttcctaattacgcacagcctaatgggcttcatcac
agccaaccaaaagcatgttctgacacagtgtggctccctcagactcgcacagctgttagt
ttacccaaccctctccattctgttggaccccacagatctaatgatggttatgggggcagc
cagggaggggtccatccaagcactgtcccatttgaagtagagcgagaagagacaaggaag
aaactccatgcaatttttaatccctatcatgtggataaggttatgggaatgttcccaaag
ctgaaagatgcccaaaaacttgcagcagagattctcaaactcaagtccaaaggagagttg
ttctaa
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