KEGG   Silurus meridionalis (southern catfish): 124385203
Entry
124385203         CDS       T08004                                 
Name
(RefSeq) ribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124385203
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     124385203
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 zf-CCCH RuvA_C
Other DBs
NCBI-GeneID: 124385203
NCBI-ProteinID: XP_046704335
LinkDB
Position
4:complement(23222620..23228950)
AA seq 601 aa
MQPACHHGISELQLKVDFFRKLGYSPQEVQAALLKLGLDTDTNAVLGELVRSGARDSPTA
NQESEDGSSGFSHRGGGGSSSKDLFRDIQRSPALEEFDSNLKPIVIDGSNVAMSHGNKEV
FSCHGIELAVNYFLERGHRNITVFVPSWRKEQPRPDVPISDQHILAELEKRKIVVFTPSR
RVGGKRVVCYDDRFIVKLAYELDGIIVSNDTYRDLQSERPEWKHCIEEGLLMYSFVNDKF
MPPDDPLGRHGPYLDNFLRKKPLLPDTKRQLCPYGKKCTYGIKCKFYHPERTSQSQRSLA
DELRDNARLSSSVHYCSEERRRSGVSQRGSSHTESGFSSYFPSLERELEYKLTLEPSVRI
PRDQLTESLHHYWDDVPTKYPACNTPLDWQSLYNPYLTNPLSSSDSGLGSYESQFSDASR
GHDDSYKISSRHNNRFYEQPDVPFACTCSSEPVVQPSIHQYPLSQHPHNCFDYGALQFRR
PSSNQPYSLPNYAQPNGLHHSQPKACSDTVWLPQTRTAVSLPNPLHSVGPHRSNDGYGGS
QGGVHPSTVPFEVEREETRKKLHAIFNPYHVDKVMGMFPKLKDAQKLAAEILKLKSKGEL
F
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgcagcctgcttgccatcatggcatctcggagctccagctgaaggtggactttttccgt
aagctgggatattcaccgcaggaggtacaagcagccctgctgaaactaggcttggacact
gatacgaatgccgtacttggagaactggtgcgctccggagccagagactcaccgacagca
aaccaggagagtgaagatggaagctctggatttagccaccgtggaggaggtggatccagc
agtaaagatctcttcagggatattcagagatccccagcattagaagagtttgacagcaat
ctcaaacccattgtgattgatggaagcaatgtggctatgagtcatgggaacaaggaagtt
ttttcatgtcatggaattgagctggcagttaactacttccttgagagaggacacaggaac
attactgtttttgtgccctcatggcgaaaagagcaacccagaccagatgtcccaatttca
gatcagcacattcttgcagagctcgaaaagagaaagatagttgtattcactccatccagg
cgggtaggaggaaagcgagtggtctgctatgatgatcgattcatcgttaaacttgcttat
gaactggatggcattattgtatctaacgacacataccgtgaccttcagagtgaacggcct
gaatggaagcactgcattgaggaggggctactcatgtactcctttgtcaatgacaagttt
atgccaccagatgaccctcttggtcgccatggcccatacctggataatttccttagaaag
aaacctctgctaccagacaccaagcgccagctttgtccttatggaaagaaatgcacatac
ggaatcaaatgcaagttttatcaccctgaacgtacaagccagtcacaacgttctcttgca
gatgaactaagggacaatgcccgtctgtccagttctgtccactactgttcagaagagaga
cgaagatcaggagtttcccagagagggtccagccacacagagtctggcttcagttcatac
tttccctcattagagcgagagctggagtacaagctaactttggaaccttctgttcgtata
ccaagagaccaactcactgaaagcctgcaccactactgggatgatgtccctaccaagtac
ccagcctgtaacactcctctggactggcaaagtctgtacaacccatacctcactaatcct
ttatctagctcagattctggccttggctcctatgagagtcagttttcagatgcatctcga
ggacatgatgattcctacaagattagttctaggcataataataggttttatgagcagcca
gatgtgccttttgcttgcacttgctcttctgagccagttgtccaaccaagcatccatcag
taccctctttcccagcaccctcacaactgctttgattatggtgcactccagttccgtagg
ccctctagcaatcaaccctacagccttcctaattacgcacagcctaatgggcttcatcac
agccaaccaaaagcatgttctgacacagtgtggctccctcagactcgcacagctgttagt
ttacccaaccctctccattctgttggaccccacagatctaatgatggttatgggggcagc
cagggaggggtccatccaagcactgtcccatttgaagtagagcgagaagagacaaggaag
aaactccatgcaatttttaatccctatcatgtggataaggttatgggaatgttcccaaag
ctgaaagatgcccaaaaacttgcagcagagattctcaaactcaagtccaaaggagagttg
ttctaa

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