KEGG   Silurus meridionalis (southern catfish): 124385251
Entry
124385251         CDS       T08004                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    124385251 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smeo03021]
    124385251 (taf12)
   03036 Chromosome and associated proteins [BR:smeo03036]
    124385251 (taf12)
Transcription machinery [BR:smeo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     124385251 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     124385251 (taf12)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     124385251 (taf12)
    STAGA complex
     124385251 (taf12)
    TFTC complex
     124385251 (taf12)
    SAGA complex
     124385251 (taf12)
    SLIK complex
     124385251 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10 Tic110
Other DBs
NCBI-GeneID: 124385251
NCBI-ProteinID: XP_046704412
LinkDB
Position
4:24086778..24091801
AA seq 162 aa
MNQYQQQPGRSNLYSAVKTESSPTPPLATSMANSTAVPGKGLGTPGPAGRVSPEGTQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQVADDFIESVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGFGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgaatcagtatcaacagcagcctggccgctccaacctgtacagcgctgtgaaaactgaa
agctcaccaactccacccctcgccaccagcatggccaatagcactgcagttccggggaaa
ggcctgggaaccccagggcctgctgggagggtgagtcctgagggaactcaggtgctcagc
aagaagaaacttcaggaccttgtgcgtgaaattgaccccaacgagcagcttgatgaagat
gttgaggagatgttgctgcaggttgctgatgatttcatagagagtgttgtgactgccgcc
tgtcagctcgcccgtcaccgcaaatccaacactctagaagtaaaggatgtgcagttgcac
cttgagcgtcagtggaacatgtggatccctggctttggctccgatgaaatccgaccatac
aaaaaggcgtgcactacagaagcacacaaacagagaatggcactgatccgcaagacgacc
aaaaaatag

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