Silurus meridionalis (southern catfish): 124385269
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Entry
124385269 CDS
T08004
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124385269 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124385269 (lrrc4bb)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
NGL family
124385269 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
LRRNT
Ig_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
124385269
NCBI-ProteinID:
XP_046704454
LinkDB
All DBs
Position
4:complement(41969758..41985358)
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AA seq
727 aa
AA seq
DB search
MWAAMLTGLCSPFPLLWLVQLLLWPYLSGPQLAEATPPCPTPCSCSNQASRVICTRKGLD
EVPQSISVNTRYLNLQENSIQMIKSDTFKHLSHLEILQLSKNHIRQIEVGAFNGLPNLIT
LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFI
SEAAFEGLVNLRFLNLGMCGLKDVPNLTPLVKLEELELSGNQLGVVRPGSFQGLVSLRKL
WLMHSRISLIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCD
VLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLDQRDFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGAYKVRISVLHDGTLNFTNVTMQDTGPYTCMV
TNSAGNTTATAVLNVSASDPGNGYSYFTTVTVETVETGQESHDSARQFVNETFINFPGPT
ASSGSTGPSGSVPSSLSPHVTRAPERPFTVSITDVANLSGLEDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEMGPTGGASGIAGGSTLHSGAGPGT
GGGPGPNLQLHDPEIVTLPNIGCSDHVKYYIKSQHFNNNVLKLNMGVGHTGNKTSPSSKK
QAPSNNQTATCIDSTNPGSVSPPLPIPIPMAMTFHGTLKSLSHTPCSQNEPLLLSNGSKE
SVQETQI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgccatgttaacaggcctctgtagccccttccccctcctctggttagtccag
ctcttgttatggccatatctcagtggaccccaactggctgaggcgactcctccttgcccc
accccctgtagctgctccaatcaggcgagccgagtgatttgtaccaggaagggattggac
gaagtcccgcaaagcatctcagtcaacacacgatacctcaacctgcaggaaaactccata
cagatgatcaaatctgacacctttaaacacctgagtcacctggagatccttcagctgtca
aagaatcacattcgtcagattgaagttggagcatttaatggcctcccaaacctcattaca
cttgagctttttgataatcgtctgcctttggtcccatcgcaagcatttgaatatctcagt
aaactgcgtgaactctggctgcgaaataatccaatagaaaccctcccagcctatgctttt
catcgtgtcccttctctccgtcgcttggacctcggtgaactgcggaagctcagtttcatc
tcagaggcggcctttgaaggactagtcaacctccgctttctgaatttgggaatgtgtgga
ctgaaagatgttcccaacttgacaccactcgtcaaacttgaggaacttgaactttcagga
aaccaacttggagttgttcgtccgggatcatttcaaggtcttgtttcactgcgcaagtta
tggcttatgcattcacgcatctcactgattgaacgcaatgcttttgacgatctgaaaaac
cttgaggagctcaacctgtcccacaattctttgcattcactgccccatgacctttttaca
ccattgcaacagctggaaagagttcacctgaaccacaatccctgggtttgtaactgtgat
gttctctggctcagttggtggttaaaggaaacagtgccagataactccacctgctgtgcc
cgctgccatgctccacctgggaccaaaggacgctacatcggagacctggatcagagagac
tttacttgctatgcccctgtgatcgtggagcctccaactgatctgaatgtgactgaggga
atggcagcagagctgaagtgccgaaccgggacatccatgacctctgtgaactggttaact
cctaatggaaccctaatgactcatggtgcttacaaagtacgaatctcagtgttacatgac
ggcaccttgaacttcactaatgtcactatgcaggacactggtccatacacttgcatggtg
accaactctgctggaaacactacagcaactgctgtcctaaacgtgtctgcctctgaccct
ggcaatggatacagctactttacaacagtcacggtggaaacagtggagacagggcaggaa
agccacgactctgctcgacaatttgtcaatgaaacctttattaattttccaggaccaaca
gcatcctcaggttcaacaggaccttcaggatctgtaccatcttctctgtcacctcatgtt
actcgtgctccagagcgacctttcacagtttccatcactgatgttgctaatctttcaggt
cttgaggatgtaatgaagacaacaaaaatcataatcggctgttttgtggccatcactttc
atggctgctgtgatgcttgtggttttctacaaactaagaaagcagcaccagctgcacaag
caccatggtcctgcccgtgccattgagatcatcaatgttgaagatgaaatgggcccaaca
gggggtgcaagtggcattgcaggtggttccacacttcactccggggcaggaccaggaact
gggggtggacctgggccaaatcttcaactccatgacccagaaatcgtcactctgcccaac
attggatgctcagatcatgtcaaatactacatcaaatctcaacactttaacaacaatgtc
ctgaaactcaacatgggggtggggcacactggcaacaagacaagcccctcctccaaaaaa
caggctccatccaataatcagacagccacatgtattgactccactaatccaggatctgtc
tctccgccgttacccattccaatcccaatggcgatgactttccatggaacactgaagagt
ttaagccacaccccctgctctcagaacgagcctctgctgctgtccaatgggtccaaggag
agtgttcaggagacacagatctaa
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