Silurus meridionalis (southern catfish): 124385590
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Entry
124385590 CDS
T08004
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A
KO
K07277
outer membrane protein insertion porin family
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124385590 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124385590 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124385590 (samm50)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
124385590 (samm50)
Transporters [BR:
smeo02000
]
Other transporters
Pores ion channels [TC:
1
]
124385590 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
124385590
NCBI-ProteinID:
XP_046704697
LinkDB
All DBs
Position
5:complement(23159325..23165050)
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AA seq
469 aa
AA seq
DB search
MGTVHARSLDPLPMHGPELGVQADDLDVGETEYEPQQEVLENRDVVVQHVHIDGLGRTKE
DFLTYEIADVFRAKNLIDVMKKSHDARQRMLRLGLFRQVEVVIDTSHGEDALPNGLDVTF
EVKELRRLTGSYNTMVGNNEGSMVLGLKLPNVFGRAEKVTFQFSYGTKETSYGLSFFKPQ
AGNFDRSFSINLYKVTGQFPWSSLRETDRGFSTEYSFPIWKTNHTLKWEGVWRELGCLAR
TASFAVRQESGHSLKSSLSHAMVIDTRNSPILPKKGALLKINQELAGYTGGDARFLKEDF
EIQLNQRLFWDSVLSASLWGGLLLPFGDKPTSIADRFYLGGPTSVRGFSMYSIGPQSEGD
YLGGEVYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLSRLAE
CIRWSYGAGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtacacgcaagaagtttggaccctctcccaatgcatgggcctgaactgggg
gttcaagctgatgatctggatgttggagaaacagagtacgagccacagcaggaagttctg
gaaaacagagatgttgtagttcagcatgttcatatagatgggcttggcagaactaaggaa
gatttcctaacgtacgagatcgcagatgtcttcagagccaagaacttgatcgatgtgatg
aaaaagagccacgatgccagacagagaatgctgcgtctgggattattcagacaagtggag
gtcgtcattgatacctcacatggtgaagacgcactgccgaacggcctggacgtcacattc
gaggtgaaggagctcaggagactaactggaagctataacaccatggttggaaacaatgag
ggaagcatggtgctgggtttgaaactgcccaatgtttttggccgcgctgagaaggttact
tttcagttctcctacggcacaaaagaaacgtcatatggcctctctttcttcaagcctcag
gctggaaactttgaccgcagtttttctatcaacctctacaaagtcactgggcagttccca
tggagttcactgagagagactgatcgaggtttttccacagagtatagttttcctatctgg
aaaacgaaccacacgctgaagtgggagggagtgtggagggagctcggctgtctggcacgc
actgcctccttcgccgtccgacaggaaagcggtcactcgctcaagtcctccctctctcac
gcgatggttattgacacacgcaactcccccattcttcctaagaaaggtgccttactgaag
atcaaccaggagttggcgggttatacaggtggagatgccagattcttgaaggaggacttt
gaaatccagcttaatcagcgacttttctgggattcggtcctctcggcctctctgtggggg
ggattactgctccccttcggagacaaacctacatcaattgctgacaggttttatctggga
ggccccaccagcgtgagaggtttcagcatgtacagcatcggaccacagagcgaaggtgat
tatctgggaggagaggtgtactgggctggagggctccatttgtatactcctctaccattc
aggccaggccgcgggggctttggagaccttttccgaacacacttctttctcaatgctgga
aacctgtgcaaccttaattatggcgaagggcctcgtgcacacctgagccgactggctgag
tgtatccgctggtcgtacggagcaggcatcgtgcttcgtctggggaacatagctcgactc
gagctcaattactgcattcccatgggtgttcagagtggagacaggatatgtgatggagtg
cagtttggagcaggcattcgcttcctgtaa
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