Silurus meridionalis (southern catfish): 124385635
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Entry
124385635 CDS
T08004
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124385635 (npas4a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124385635 (npas4a)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
124385635
NCBI-ProteinID:
XP_046704768
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All DBs
Position
5:16020871..16026845
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AA seq
926 aa
AA seq
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MYRSTKGASKARRDQINTEIRNLRDLLPISDADKARLSYLHIMSLACIYTRKSVFFCQEE
AAAGSAEESAGFLSFHELSELVQSMPGFLLLLTAEGKLLYLTDSVSEHLGHSLVDLVAQG
DSVYDIIDPTDHAIMRSNLVPPTSPDCDRLFRCRFNTSKSVRRQSAGNKLVLIRARCLSS
VPDPSPQGSYWTSNPVWVCFCTPLEPHPPRPSTSTEQALTPSLESTFLLECFRSQHSRDM
RLQDAHDSISVYLGMDVETLRSRSWYSLLHPQDLTHASAQHRSLLREGGEGRAEMVIRVE
AGDCSWVWLYMVLQLETGENPISSNNYVISESEAWAVRQQLSSEESQLSVVLSTSTSQQD
TLSLQSPDTLSSPDQVFTPGSSGLSGQSFDFSMAVCSTGSTEEQGASSSIEPMALESGPR
SSISSLEEETLFQHPPSESIERPSAASSPDTVATVSDLDFLTQNILLPPAFQVDPPLPAL
PLPLPPVPTSQAQQTKEFVCTPPYTPQLGSSSFPFGEPLFSFDPTGATTPPPLPPTATVT
TTVAPTLSPSAPSDPQGSPTPPTTTLSSQVPLTLPALSTEILFHSEPCSGSLYEKLPPTP
DSPGDGDCTVMSLPEVRGPLYVDVPYGPLPFPPEGLLTPETSPGKQPSLSFFSIEQEREK
ERTEISLLAHHISTLAEGFYLDPLLSKLLPSPISPRPSSPSFGSEGPETISLLGEFYPVK
SWRGLDLPIFPDDDSLFEESVLETIFQDLSSPSLSSTPSPPSSPPSSPLTPECWQPPLHF
DRVSTMSAGHFCSVQSAHSNHATRCGVTLSPVNKGDIVDGKVAGEVAMETEVVPSPLSTS
IPASPPLQLTVSPVTPVPVDSPVSPASPGLPCAQSLLEELAALEPMFGAGASIASGLGQQ
PELYQLQSHLPQQCFHKDGSGSDPPF
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgttccactaaaggagcctcgaaagctcggagagaccagataaacacagagata
agaaacctgagggacttgttgcctatctccgatgcagacaaggcacgcctctcctatcta
cacatcatgtcccttgcgtgcatatacacgagaaaatctgtcttcttttgccaagaggaa
gctgcagctggcagtgctgaggaaagtgcaggattcctctcatttcacgagctttctgag
ctggtgcagtcaatgccaggttttttgctgttactaactgcagaaggaaaactactttac
ttgaccgacagtgtctctgaacaccttggacattcattggtagatttggttgcccaaggg
gatagtgtgtatgacataatagaccctacagaccatgctattatgaggagtaacctggtg
cccccaacttcccctgattgtgatcgattgttccgatgccgtttcaacacctctaagtca
gtgcgaaggcagagtgctggcaacaagcttgttttgattcgagctcgctgcttgtcatca
gtacctgacccttccccacaaggatcctactggacatctaatccagtgtgggtgtgcttt
tgcacacctctggaaccacacccacctcgacccagcacctcaactgaacaagctttaacc
ccatctttggagagcactttcctcctagagtgttttcgctcacaacacagtcgtgacatg
agactgcaggatgcacatgatagtatcagtgtttatctgggtatggatgtggagactctt
cggtctcgttcctggtacagtctacttcatccacaggaccttacacatgcttcagctcag
catcgcagccttttaagagaaggaggtgaaggcagagctgaaatggtgattcgtgtggag
gctggtgattgttcatgggtctggctttacatggtcctccagctggagactggagaaaac
cccatcagtagcaacaattatgtcattagtgaatcagaggcctgggcagtgagacaacaa
ttgagctctgaagagtctcagctctctgtggtgctgagtacaagcacctcccaacaagac
actcttagcttgcagagtcctgatacactctctagtcctgaccaagtgttcacacctggg
agcagtggcctttcgggtcagtcgtttgacttcagcatggcagtgtgcagtacaggctct
acagaagaacaaggtgcaagctcctctattgaaccaatggcactggaaagtggtccacgc
tctagtatttcttctctggaggaagagaccttgttccagcatccacccagtgaatcaata
gaaaggccttcagctgcttcatcccctgacacagttgccactgtgtcagatttggacttt
ctcacccagaacattctcctgccacctgcttttcaagtagatcctccactgcctgctcta
ccccttcctttaccccctgtacctacctcccaggcccaacagactaaggagtttgtgtgt
acccctccatatacaccccagctaggaagcagcagctttccctttggtgaaccacttttt
agttttgatcccacaggtgccaccacacctccaccccttccaccaactgcaacagtcaca
actacagtagctcccactctttccccatctgctccctcagatccacagggcagccctact
cctccaaccaccacactttccagccaggtgcccctcaccctgccagctttatctacagaa
atactcttccattcagagccttgcagtggctcactctatgagaagcttcctccaacccca
gacagtccaggtgatggggactgcactgttatgagtctgcctgaggttcgtggtccactg
tatgttgatgtcccatatggaccactccccttcccacctgaaggcctgctcacacctgaa
acctcacctggaaaacaaccaagtctgtctttcttctcaattgagcaggaaagagaaaaa
gaaagaactgagatatcccttttagcccaccacataagcacactagctgagggcttctac
ctggatcctcttctctctaagctgttaccctctcctatctctcctcgaccttcatctccc
tcatttggctcagaaggtcctgaaaccatctcacttctgggtgaattttatcctgtcaaa
tcctggagaggtctggatctgcctatcttcccagacgatgactctctgtttgaagagagt
gttttagagaccatatttcaagatctctcctcaccatcactctcttccaccccttcacct
ccctctagtcctccctcttctccactaactcctgagtgctggcaaccacccctgcacttt
gacagggtctctactatgagtgccggccacttctgtagcgtccaatcggcgcactctaac
catgcgaccaggtgcggggtcacactgtcaccagtcaacaagggtgacatagtagatggg
aaggtggcaggcgaagttgccatggagacagaggttgtgccatcgccactgtcaaccagt
atcccggcatctccaccgctacagctgacagtctcgcctgtcactccggtgcctgtcgac
tcacccgtcagccccgcatcacctggtctgccctgcgcccagtccctcctcgaggagctg
gccgccttggaacccatgtttggggcaggtgcctcgatcgcctctggcctggggcaacaa
cctgagttgtatcaactccaaagtcacctgccacaacaatgcttccacaaagatgggagt
ggaagtgatcctccgttctaa
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