Silurus meridionalis (southern catfish): 124385666
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Entry
124385666 CDS
T08004
Symbol
canx
Name
(RefSeq) calnexin
KO
K08054
calnexin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
smeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124385666 (canx)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124385666 (canx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smeo03110
]
124385666 (canx)
04131 Membrane trafficking [BR:
smeo04131
]
124385666 (canx)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
smeo04091
]
124385666 (canx)
Chaperones and folding catalysts [BR:
smeo03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
124385666 (canx)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
124385666 (canx)
Autophagy
ER-phagy
Other ER-phagy associated proteins
124385666 (canx)
Lectins [BR:
smeo04091
]
L-type lectins
124385666 (canx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Connexin
PFF1_TM
CCSMST1
SpoIIIAH
Piezo_TM1-24
V_ATPase_I
DDHD
DUF6080
SID-1_RNA_chan
Neur_chan_memb
CLN3
FAM176
Zip
Motif
Other DBs
NCBI-GeneID:
124385666
NCBI-ProteinID:
XP_046704813
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All DBs
Position
5:9476405..9499734
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AA seq
605 aa
AA seq
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MELKVRLCVLLLALSVCVTLQARAHEEDEEEDVNVEDDMANLADEEMLDEDGEVDVEEEG
KPTPIAAAPTVTYKAPEPKGEHFFAESFDKGTLDGWVVSQAKKDSIDEEIAKYDGKWEVE
EMKETKLPGDKGLVLKSRAKHHAISALLLRPFTFDTKPLIVQYEVNFQNGIDCGGAYVKL
LSQSADLNLDEFLDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEFEEKHAKKPDADLR
TYFTDKKTHIYSLVLNPDNSFEILIDQTVVNSGNLLSDMTPAVNPTSEIEDPDDRKPEDW
DERPKIQDPDAVKPEDWDEDAPAKISDEDAVKPDGWLDDELEYIGDPDAVKPEDWDEDMD
GEWEAPQVPNPACESAPGCGKWERPMIDNPNYKGKWKPPMIDNPNYQGVWKPRKIPNPDY
FEDLHPFRMTPVSAVGLELWSMSSDIFFDNFFITSDRSVAEKWAEDGWGLKKAAEGAAEP
GLVNQMMSAAEERPWLWVVYVLTVALPVILIFVFCCTGKKKPATSAAEYKKTDEPQPDVK
EEEEEEEEEAKDEEPETKAEAEESPAEAAAPEEEEAEKQEDKSDEKKEDDVLRRSPRSRV
RPRKD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaggtgcggctgtgcgtgctgctgctagcgctgagcgtgtgcgtgacgctc
caggcgcgggctcacgaggaggacgaagaggaggacgtgaacgtggaagacgacatggcc
aacctggcagatgaagagatgctggacgaagatggagaggtcgatgtcgaggaggaaggg
aagccgacacccatcgccgcagcacctaccgtgacgtataaagccccagagcccaaggga
gagcacttctttgccgagtcgttcgataaaggaacgctggacgggtgggttgtgtctcag
gcaaagaaggacagcatcgacgaggaaatcgccaagtacgatggtaaatgggaggttgag
gagatgaaagagacaaagctgcctggcgataaaggccttgtgctcaagtccagagccaaa
catcacgccatctccgctctcctgctgcgaccttttaccttcgacaccaaacccctcatc
gtccagtacgaggtgaacttccagaatggaatcgactgcggcggcgcctacgtcaaactg
ctctctcagagcgcagacctcaacctggatgagtttctggacaagaccccatacaccatc
atgttcggaccggataagtgcggcgaggactacaagcttcacttcatcttccggcacaag
aaccccaaaacgggcgagttcgaagaaaaacacgccaaaaagcccgatgcagacctccgc
acatacttcacagataagaaaacccacatctactcgctggtgctaaacccagacaacagc
ttcgagatactgattgaccagacggtggtgaacagcggaaacctgctgagcgatatgacc
cccgcagtaaaccctacttctgagatcgaagatcccgacgaccgcaaacctgaggactgg
gacgagagacctaagatccaggacccagatgcagtcaagcctgaggactgggatgaggat
gctccagctaagatcagcgatgaagatgcagtgaaacctgacggctggctggatgatgaa
ctcgagtacatcggagaccctgatgcagtcaagccagaggactgggatgaggatatggat
ggtgagtgggaggcaccccaggtcccaaaccccgcctgtgagtccgccccaggctgtgga
aaatgggagaggcctatgattgacaaccccaactacaagggcaagtggaagccaccaatg
atcgataatcccaactatcagggagtttggaaacccaggaagatccccaatcccgactac
tttgaggatctgcacccgttccgcatgacccccgtcagtgccgtgggtctggagctctgg
tccatgtcctcagatatctttttcgacaacttcttcattacatcggaccgcagtgttgct
gaaaagtgggctgaggatggctggggcctgaagaaagccgcagagggagcagccgagcct
ggacttgttaatcagatgatgtctgcagcagaagagagaccctggctctgggtggtctat
gtcctgacagtggctcttcccgtcatccttatctttgtgttctgctgcactggaaagaag
aagccagcaacctctgctgctgaatacaagaagactgacgagcctcagcctgatgtgaag
gaggaagaagaagaggaagaggaggaggccaaggatgaagagccagagacgaaagccgaa
gcagaagaaagccctgcagaagcagctgcaccagaagaagaggaagcagagaaacaggaa
gacaaatcagatgagaagaaagaggacgacgttctgcggaggtccccaagaagcagagtg
cgacctagaaaggactga
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