Silurus meridionalis (southern catfish): 124385678
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Entry
124385678 CDS
T08004
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124385678 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124385678 (nup62l)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124385678 (nup62l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Plasmodium_HRP
Motif
Other DBs
NCBI-GeneID:
124385678
NCBI-ProteinID:
XP_046704827
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All DBs
Position
5:complement(8067376..8078957)
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AA seq
651 aa
AA seq
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MSFSFGQPSGGGGFSFGTPKTTATTGAVPGFSLPTNAPPSGGFSFGAVPQQQPQAPATTS
QIAGLLAQTTTSTGAPQGGFSFGAAAQSSTPGGGFSFGGAPKLSLGLTPASQPASTAATL
GGLLNSSNSSSGTGFTFGGLATQTAASTQQPTGGFSFPGAKVQAPAATTAQSTPSFSLGG
QSTGLTLGSAVATLASSTGINFGIKPAGLATPTPASTAAASAQALQVAQASQALQVAQAS
QALQVAQASQALQVAQASQALQVAQASQAAQAAQASQALQAAQAAQASQALQAAQAAQAL
QAAQASQAFQATQASQAVQASQAAPVSSLFAIAVPPTSAPSFSLGGLISTAAPAASSATA
STGLMLKPLGAANTTGTTAAAVSSAATTSFSLGLKPAVSAAPPISTVVSTAAVIASAAPV
MSYAQLESLINKWSSELEDQERHFLQQATQVNAWDRMLVENGEKITSLHKDMEKVKLDQR
RLDQELDFILSQQKELEDLLIPLEESVKEQSGTIYMQNADEERERTYKLAENVDAQLKRM
SQDLKEIIEHLNTSNGLADTSDPAVDPFKHRVIASRLSFIMDNAEPQTKHQGKTSLGFAL
QQICKILNAHMDSLQWVEQNSVLLQRRVEEVSKLCESRSKEQEKSFRLSFQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcagcttcggacaacctagcggtgggggcgggtttagcttcggcacccctaaa
accacggcgacgaccggtgcggtccccggcttctcgctgccgacgaacgctcccccttca
ggaggattcagtttcggagcagtgcctcagcagcagcctcaggccccggcaacgacttct
caaatcgctggactcctggcacagaccaccacgagcactggagccccacagggtggattc
agcttcggtgcggccgcacagagcagcactcctggtggaggcttttctttcggaggtgct
ccaaaactgagtctcggcttgactccagcttctcagccggcctcgacagcagcgactctg
gggggcctgttgaattcctccaactcgtccagtggcacaggctttacatttggaggactg
gcgactcagactgcagcttcaacccagcagcccacaggaggcttcagctttcccggggca
aaggttcaggctcctgcagcaactacagcacagagcactccttccttctcactggggggg
caaagcacaggtctcactctgggcagtgctgttgcaacccttgcttcctcgactgggatt
aactttgggatcaagcctgcaggtctggccacgccgactcctgccagtactgctgctgct
tctgcccaggctctccaggttgcccaggcttcccaggctctccaggttgcccaggcttcc
caggctctccaggttgcccaggcttcccaggctctccaggttgcccaggcttcccaggct
ctccaagttgcccaggcttcccaggctgcccaggctgcccaggcttcccaggctcttcag
gctgcccaggctgcccaggcttcccaggctcttcaggctgcccaggctgcccaggctctt
caggctgcccaggcatcccaggcttttcaggctacccaggcttcccaggctgtccaggct
tcccaggctgccccagtttcctcactgtttgccattgctgtcccccccacttcagctcca
agcttcagcttgggaggtttaataagcacagctgccccagcagcatcttcagctacagcc
tccactggcttgatgctcaaaccacttggagccgccaacaccaccggcactacagctgca
gctgtttcttcagcggccaccacaagcttttcactggggctgaaacccgccgtctctgct
gcaccgcccatttctacagtcgtgtccaccgctgcagttatcgccagtgctgcaccagtg
atgtcttatgctcagctggagtccttgatcaataagtggagttcagagctggaggaccag
gagagacacttcctacagcaggccactcaggtcaacgcctgggaccgcatgctggtggag
aacggagagaagattacatcacttcataaggacatggagaaggttaaactggaccaaagg
aggctggatcaggaattagactttattctgtcccagcaaaaggagctggaggatcttctt
attcctttggaggagtcggtaaaggagcaaagtgggaccatctatatgcagaatgccgat
gaggagcgagagagaacgtacaagttggcagaaaatgtcgatgctcagttgaagagaatg
tcccaagatctgaaggagatcatcgagcacctcaacacatccaacgggctggccgacaca
agcgacccggcagtggatccttttaaacatcgagttattgcatcaaggctttcattcatc
atggacaatgctgaaccccagaccaagcaccaggggaagacgtctcttgggtttgctctc
cagcagatctgcaaaatcctcaatgctcatatggactctctgcagtgggtcgagcaaaac
tctgttctgcttcagaggcgtgtggaggaggtgtccaagctgtgcgagagccgcagtaag
gagcaggagaagagctttcgtttaagttttcagtga
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