Silurus meridionalis (southern catfish): 124385725
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Entry
124385725 CDS
T08004
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124385725 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Other domain-containing proteins
FERM domain-containing proteins
124385725 (frmpd1b)
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Ortholog
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GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
PDZ_2
FERM_C_FAK1
FERM_f0
DUF8444
Motif
Other DBs
NCBI-GeneID:
124385725
NCBI-ProteinID:
XP_046704924
LinkDB
All DBs
Position
5:complement(17419126..17453102)
Genome browser
AA seq
1600 aa
AA seq
DB search
MEERERSRSRSPRRVRRVEQVVGRWLRRSRDSLSRERILGDRKSGRSDDGGQHHFPVKET
VEVIRDAVLDSHGFTLSTQLPLLVRDVIPGGPADGRLLPGDQVLKVNNKAIDDLSPEYID
NMIRQCQDSVTVTVLRNMLNPKSSFMSAEKRARLRRNPVKVRFAEEVLVNGHTQGNSLLF
LPNVLKVYLENGQTKAFKFDKTTTVKDIVLTLKDKLSIQSIEYFSLVLEQQYSITKLLLL
HEDELIQKVVQKKDSHDYRCLFRVCFIPRDPVDLLHDDPVAFEYLFHQSVGDVLQERFAV
EMKCNTALRLAALHMHERLASCGQTTRASIKNIIKEFGLESFISPTLLRNMREKDLRKAL
TSHMKKIQSLLEPRQKIISVPQARLAYLTQMAELISYSGRSYNATMLLQDRESLVSLLVG
ARFGVGQILNHKLNMISTIIDFHYISRVEVLSESDRVSMLKIYLHDIQPLALLMDSVAAK
DLACLLAGYCKLLVDPNMNVFRWGPRPKIRRIPLEEGFGFRCGSDSDESSDEDYSMDNLV
DTPVSEDTVSTQTNDDREDEKDEEIQEAKAGIVRVIVTQIEKVEKEDDGALEGTSTCGSI
EDEDYAARVDALLETGWYTDPRVNSSFSSLSSNSFNTLDEISRVSNTWPAPLDSFQEEMP
KSDQASGASSLDVHHPYLLEIPEQLNQKEILNPPSKLLYDKHSGLRYSDLSQMSDSLPSP
PEASDDALSDLEEINKDENKNYTSADIDAVLASVSSNSIKSTVASFNVQALLARIRNHPA
CKKDLRNLHQKEEARSKGTLSRPKVQPPPPPPRAVSRVSELAKDIRNSGSESEDEFFDAQ
DRLTPPILEQPAEKKISGNGIEHALKKTSAKISVEEPATSKMQSQLDKPLDNSLSISRNN
LKMDSSMHEGLTPAKNFPGNKELNGPPAKTISNDHILEKMGQQCNGDIHGHNAHMSSELL
EMEPDTMEFKPVTTVGPPRSSPLITAVRRSNSQLSTTVDSATLSNDVQNITQHIDSKEDE
LHKKEEREEHQSLPSLQSVKEQDQEPDKLIFKVLQSSASLALKTADEKPSNGISLHTWSQ
RNGSTQGLPLSKGVSLSHENLKCQLRNESTAISGSSASILTATTTPSVVMRGSISLDPKD
SFGIGRNFSSRNSSGRLSASALRGKIQDMPWYLTRSHEILGTIALSSDKLGYPTASKGAA
DYKDSTKESPKSTSVPALNDWKEKDAEVVVVKLKDGPQEVASHVKDPGEQTSFSGHPDLS
QNGLQDSTELFSRLGTCRSEQPKSQKNSGTKDSLERPSPPSSISTPHRDACGCHTVYANC
FSGDSEDVCGFDEDLTVYEFSRQKRVNKPPQASIAPSSAPSSNILSLLRDSPHPLSSSSE
LSPLFTPPRPRPLGYNPMDNPLRDLQERRYVTGLKGSGLKGGYMSLHKDIDELLLVLKNG
ETAINAPGQKGPCEKASGMNGNSFSETERCLVQAEARRLAAGCQRATRVGWAPDDALLSL
GNSFGALVHLAAACLQVSCSHCGSCHGDIDGTEALRKLQEIVCLYKEFVIAVEAARDGEG
VRLLAKQCTVLISTVFSLTQLFRTHTPDTDTDTRHLALNF
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagagagaggagtaggagtcgctctccacgcagggtgcgtcgggtagagcag
gttgtggggagatggctgcgtcgatcacgggactccctcagcagggagcgtattttgggg
gacaggaagtcaggccgctcagacgatggaggccaacaccatttcccagtaaaggagact
gtggaggtgatcagagatgctgtgctggactcgcatggctttacactctccacacagctt
cccctgctggtcagggatgttattccaggaggaccagcagatgggcggcttttaccaggt
gatcaagtattgaaagtgaataacaaagccatcgatgacctatctcctgaatatatagac
aacatgattaggcagtgccaggattctgtaaccgtgacagtcctcagaaacatgttgaac
cccaagtcctcatttatgtcagcagaaaagagagctcgactgagaagaaatccggttaaa
gtgcgctttgcagaggaagtattagtcaacggacacactcagggaaactctcttctcttc
ctgcccaatgtgcttaaggtctacctagagaatgggcaaaccaaagccttcaaatttgat
aaaactaccacagtgaaggacattgtgctgactttaaaggacaagttgtcaattcaatct
attgagtatttctctctggtgctggaacagcaatacagcatcaccaagctgctgttactg
catgaagatgagctcatacagaaggtggtccaaaagaaggactcgcatgattacagatgc
cttttccgagtttgttttattccccgagatccagtggacttgctgcatgatgacccggtc
gcttttgagtacctttttcatcagagcgttggggatgtgctgcaggaacggtttgcagta
gagatgaaatgtaacactgctttgaggctagcagcattgcatatgcatgaaaggttggct
agttgtggacaaactactagagcatctatcaagaatattataaaggagtttggattggag
agttttatttcacccacactactgaggaatatgagggagaaagatttgaggaaagctctt
acaagtcatatgaagaaaatccagtcactgcttgaaccgcgtcaaaaaataatctcagtg
cctcaagccaggttagcatatctaacacagatggcagaattgatatcatatagtgggaga
tcctacaatgccaccatgctgctgcaggaccgggagtcgttggtgagtttgttggtggga
gcacgatttggtgtcggtcagatactaaaccacaagctgaacatgatctcgactattata
gacttccattatatcagccgtgtagaagtgctctctgagtctgacagggtcagcatgtta
aagatctacctacatgatatccagcccctggctttgctgatggattctgtagctgctaag
gacttggcatgtctgctggctggctattgtaaattgttagtggatcccaatatgaatgtg
ttccgctggggccctcggcccaaaatacgtcgtataccgttagaagaaggctttggattc
cgctgtggcagtgactcagatgagagctcagatgaggactactccatggacaacctggta
gatacaccagtctctgaggacactgtctccactcaaacaaatgatgacagagaagatgag
aaagatgaagagatacaagaagccaaagcaggtattgtaagggtgattgtgacccagatt
gaaaaagtggagaaagaagatgatggtgctctggaaggaaccagtacatgtggctctatt
gaggatgaagactatgcagcaagagtagatgcacttctggaaacaggatggtacacagac
ccaagagtcaacagcagtttttctagtttgtccagtaactcatttaacactcttgatgag
attagcagggtatccaatacatggcctgctcctttggactcttttcaggaagagatgccc
aaatcagaccaagcttctggagcctctagcctggatgttcaccatccttacctgctagag
atccctgaacaattgaaccagaaagagatattaaaccccccttctaaattgctctatgat
aagcacagtggcttgcggtacagtgacctttcccaaatgtctgactcccttccaagccca
cctgaagcaagtgatgatgctctgagtgatttggaagagattaataaagatgaaaacaaa
aattatacatctgcagatattgatgctgtgctggcttcagtcagtagtaatagcataaaa
tctacagtagctagctttaatgtccaagcacttttagcaaggatacgtaaccatccagca
tgtaagaaagatttaagaaacctccaccagaaagaggaagcaagatctaaaggcaccttg
tcaagaccaaaagttcaacctccacctcctccaccaagagcagtgtccagagtttcagaa
ctagcaaaagacatcagaaacagtgggtcagaatcagaagatgagttctttgatgcacag
gatcgtctcactccaccaatcttagaacagcctgcagaaaaaaaaataagtggaaatgga
atagagcatgctctgaaaaagacttctgcaaagatcagtgtggaagaaccagcaacatcg
aagatgcagagtcaactggacaagccgcttgataattctttatctataagtagaaacaac
ctgaagatggatagttccatgcatgaaggtctcactcctgcaaaaaattttcctggtaat
aaagagctcaatggtccaccggcaaagactatctcaaatgatcacatcttggaaaagatg
gggcagcaatgtaatggagatattcatggacataatgctcacatgtcctctgaacttttg
gaaatggagccagacactatggagtttaagcctgttactacagttggtccaccaagatct
tcccccttaatcacagcagtgcgacgaagtaattcccagttatcaaccacagtggattct
gcaacactttcaaatgatgttcaaaatatcacacaacatatagactcgaaagaagatgaa
ctacataaaaaagaggaaagagaagaacaccaatcactgccttctctgcagtctgtgaaa
gaacaagaccaagaacctgacaaacttatatttaaagttttgcaatcatctgctagtcta
gctctaaaaactgcagatgagaaaccatcaaacgggatttctttgcatacctggtcccag
cgaaatgggtcaacacaaggccttcctctgagtaaaggggtctctctgagccatgaaaat
ctcaaatgccaactaaggaatgagagtactgcaatttcaggaagcagcgcttcaattttg
acagccactacaaccccatctgtggtgatgagaggctctataagcttggatcccaaagat
tcatttgggattggaaggaattttagcagcagaaattcttctgggcgactgtctgcctca
gcactacgtggaaagatccaggacatgccctggtatcttaccagatcccatgaaattttg
gggacgatagcacttagcagcgataaattaggatacccaacagcatccaagggtgcagca
gattacaaggactcgacaaaggaatctccaaaatctacttcagtacctgctttgaatgat
tggaaagaaaaagatgccgaggtggttgttgtaaagctcaaagatgggccacaagaagtg
gcctcgcatgtaaaagacccaggtgagcaaacgtcattttctggtcatccagacctgagt
cagaatggattacaagactccactgaacttttctcacgcttggggacgtgcaggtctgaa
cagccgaagtctcaaaaaaacagtggtacaaaggatagtctggaaaggccatctcctcca
tctagcattagcacaccccaccgtgatgcatgtgggtgccatactgtttatgccaattgc
tttagtggggatagtgaggatgtgtgtggttttgatgaggatctgacagtatacgagttc
tcccgtcaaaaacgagtcaacaaaccaccccaggcctctattgctccttcctctgcccca
tcttccaacatcctgtctctgcttagagactcaccacaccccctttcaagttcgtctgag
cttagccccctctttactccacctcggcctagacctctgggatacaacccaatggacaat
ccacttcgggatcttcaagaaagacgatatgtaacaggcctaaaaggttctgggcttaaa
ggtggctacatgtccctgcacaaagatattgatgaacttttgctggtgcttaagaacggt
gagactgcaataaatgctccaggccaaaaggggccatgtgaaaaggctagtggtatgaat
ggcaattccttttctgaaacagagcgttgtttagtgcaggccgaggcacggaggctggca
gcaggatgtcagcgtgccacacgagttggttgggcaccggatgatgctcttctctcactg
ggcaatagctttggagctttggtacatctagcagcagcttgccttcaagtgtcctgttca
cactgtggaagttgccatggtgatattgatggcactgaagccctaaggaagcttcaagaa
atcgtttgtctgtacaaggagtttgtgatagctgtagaagcagcccgggacggggagggc
gtcagattgttagctaaacaatgcacggttctcatctctacagtcttctctttaacgcag
ctttttaggacacatactccagacacagacacagacactagacatttagccctaaacttc
tga
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integrated database retrieval system
