Silurus meridionalis (southern catfish): 124385761
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Entry
124385761 CDS
T08004
Symbol
ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124385761 (ppargc1b)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
124385761 (ppargc1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
124385761
NCBI-ProteinID:
XP_046704982
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Position
5:complement(20485287..20524164)
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AA seq
834 aa
AA seq
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MADCVSLLDEELSSFVFNYLTENSGSPYGEEEVCSDRLDTDFPDFDLSQLDTSDFDSVNC
LSELHWCNDHSDSSPASIQYSTGDVELFETEEENAALLAALTDSLDGIVEDGVGGLSVFP
SLGEEPEEEEEEEDELLLESEPVQGSLSPETEDPSLLKKLLLSPPNVPVSLDLNRLSSTL
SKTQQLKSCRPLLKRDKACTVERKPRAFRPPGHLCTELHRHLTQEANTEDTPAADTEEEE
EEEDEDSDSEDGEGEDEEEEESSSSSEVESSMCTEPLEPQFPSEKERHSVVELIRYMHTY
CVPSRKQASWDRKERENVTRKTKTETPAFPRNATPCCPKPATQPNTLSNISTSRGAKPRL
PFVRPREAKAHSLLKELLEAVASFDVTKPYRLHSPPYSHSRPATARPKAEHKDTGVNEGS
QMAVKRPKCPEIDEGSFSVRRSRRLATFPSRFAKRQRSSRHSSEEESSVHHAAMDPPADV
NTDLKAHSQKSPEIPDLCCNDEKRACLCLPLTPKSSGDPSRPFEQTLCVELCGTAGLTPP
TTPPHKPVDEELFKPEGKAEPPEKGLCPVRTHLRKLPEQTELYAQLQRMGPAGESQNKGA
YRDHDYCMLNIGESHKRIAAILPVSVCYAKGQEGEEDKMEEKNRQEETEAQQTDFPSDFY
PNQPAETGQPSPARSPTPEADSECPDSCQPPSPCHQINRSCESHCDKQSNNTTHGQEEDG
DKCQVFYIHNLPSSVTQAVLRKRFRAFGDPEDCRVLVKKEERCGVITFRQNQNELSQKHR
QHDSVGQYAGNGNRRFSRKRYIDLDEAGPGPVKSKYDALDFDTLLKEAQRSLHR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgtttcgctgttggatgaggagctctcttccttcgtgttcaattacctg
acagaaaactccggaagcccgtatggggaagaggaggtgtgctcagaccgcctggacact
gatttccccgacttcgacctctctcagctggacaccagcgactttgactcagtgaactgc
ctcagcgagctacactggtgcaatgaccactcagacagctcccccgcctccatacagtac
agcacaggggacgtcgagctctttgagacggaagaggagaatgcggcactactcgccgct
ctcacagacagcctggatggcattgtggaggacggggtggggggtctgtctgtgttcccc
tcgctgggggaagagcccgaggaggaggaggaggaggaagacgaactccttttggaaagt
gagcctgtccaaggctcgctgagcccagagacagaagacccgtctctactgaaaaagctc
ctgctttcccccccaaatgtgcctgtgagtctggatttaaacagattgagcagcacgctt
agtaagactcagcaactcaagtcctgccgtcctcttctgaagagggacaaagcatgcaca
gtggagcggaagccacgagccttcaggcctccgggtcatctctgcaccgagctgcaccgc
cacctcacgcaggaggccaacaccgaggacacacctgcagctgataccgaggaagaggaa
gaagaagaggatgaggacagtgactcggaggatggagaaggggaggacgaagaggaagag
gagtcttcgtccagcagtgaagtggagagcagcatgtgcactgagccacttgagcctcag
ttcccttcagagaaggagcgccactctgtggtggagctgatccgctacatgcacacatac
tgtgtcccgtcacgcaaacaggccagctgggaccgcaaagagcgtgaaaacgtgacacgg
aagaccaagactgaaacccctgcattcccccgtaatgccaccccctgctgtcctaaacct
gctacccaacccaacactctgtccaacatcagcaccagtagaggagctaaacctaggctt
ccttttgtacgcccccgggaagctaaagcgcactctctgcttaaggagctgctggaagcg
gtcgcttccttcgatgtgaccaagccttacagactgcacagccccccgtatagccacagc
aggcccgccacagctcgacccaaagctgagcacaaagacactggtgtcaacgaaggctct
cagatggctgtcaagcgacctaaatgccccgaaatagacgagggctcgttttcggtgcgc
cgctctcgtcgcttagccacattcccgagtcggtttgcaaaaagacaacgttcgagtaga
cactccagtgaggaggagagctcagtccaccatgctgccatggatccccccgctgacgtc
aacactgaccttaaagcgcactcccagaagagccctgaaatcccagacctctgctgtaat
gacgagaagcgtgcctgcctttgcctgccgctgactcctaaatcctcaggagatccaagc
cggcccttcgagcagactctctgtgtggagctgtgtggcactgcaggactcaccccgccc
acaacgccaccccacaaacctgttgacgaggagctcttcaaacctgagggcaaagccgaa
ccgcctgaaaagggattgtgcccagtgcggacacacttgcggaagcttccggagcagacg
gagctatatgcccagctgcagcgcatgggcccggcgggcgagagccaaaacaagggtgcc
tacagagaccacgactattgcatgctaaacataggggagagtcacaaaaggattgctgcc
atcctcccagtgtctgtctgctacgctaagggccaggaaggcgaggaagacaagatggag
gagaaaaacaggcaggaggagacagaggcccagcaaactgatttcccctctgacttttac
ccaaaccaacctgcagagacaggacagccctcacctgcccgctcacccactcctgaggct
gattctgagtgcccagactcatgccagcccccctctccctgccatcagatcaaccgcagc
tgtgagagccactgtgacaagcagagcaataacactacacatggacaagaagaggatggg
gacaagtgccaagtattttacattcacaatctgccgagcagcgtcacacaggccgtcctg
cgcaaacgcttcagggcctttggcgacccagaggactgccgggtgctcgttaaaaaagag
gagcgctgtggagtcatcacttttaggcagaatcagaacgagctgagtcagaagcacaga
caacatgactctgtgggtcagtacgctggaaatggcaaccggaggttcagcaggaaacgc
tacatagacctggatgaggcaggaccaggcccagtgaagagcaagtatgacgctctggac
tttgacactttgcttaaggaggcccagaggagtctgcaccgctga
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