Silurus meridionalis (southern catfish): 124385814
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Entry
124385814 CDS
T08004
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124385814 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124385814 (cstf2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
124385814 (cstf2)
U7-dependent histone pre-mRNA processing factors
124385814 (cstf2)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
124385814
NCBI-ProteinID:
XP_046705130
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Position
5:complement(13270044..13278374)
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AA seq
524 aa
AA seq
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MMANVATAVAAAAGRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRE
TGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIE
SPYGDSCPSEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYAL
LQAQVVMRIVDPEIALKMLHRQAAVQPINPSSQSGPLPVPNQPHAQPSAPVSQPQAMPGM
HVNGAPQMMPPSQMGGGVPGPMAGQGPMPGQGPMPGPGPLGPGGGMQPQMGIPQGGPVPM
DRGAGSLQDSPVGSSGPAAIERPQVPMVDPRAPMRGAPPGPQGIPPRGLLGDGPNDPRGG
SLVNVGGEVVEPRGYMGGPPPHQGPPMHMGPPEMRGPHDMRGAPMLGEPRGPMMDQRGPP
MDSRGQIPPGRDPRAVETRGPAAGQRVPVAGGMQGAPSHAMPSNAPPSARPGPASEVSSQ
DHEKAALIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKTAGAP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaacgtagcgaccgcggtggccgcagctgccggaagagaccctgctgtagac
cgctctttaagatctgtcttcgtgggaaatataccatatgaagcaacagaagagcaactg
aaagacatcttctcagaggttggacttgttgtcagtttcaggttggtatatgacagagaa
acaggaaagccaaaaggttatggcttctgtgagtaccaggaccaggagacagccctcagc
gccatgcgcaacctcaacggtcgagagttcagtggccgagccctgcgtgttgacaatgca
gccagtgagaaaaacaaagaagagctcaaaagtttgggcactggagctcccatcattgag
tcaccatacggagatagctgcccatctgaggaggctccagagtctattagcagagctgtg
gctagcctgccaccagagcagatgtttgagcttatgaaacagatgaaactgtgtgttcag
aacagtccacaagaggccaggaacatgctcctgcagaatccccagctagcctacgctctg
ctgcaggcacaggtcgtcatgaggatcgtagaccctgagattgctttgaaaatgcttcat
cgacaagctgctgtgcagcccataaatcctagcagccagtcagggcctttgccggtgcct
aatcagcctcatgctcagcccagtgctccagtgtcccagccccaggccatgccgggaatg
catgtgaatggtgctccccagatgatgccaccttctcaaatgggaggtggagtaccaggg
ccaatggcaggacaggggccaatgccaggacaaggccctatgccaggaccagggcctctg
gggcctggaggtggaatgcagcctcagatggggatcccccaaggaggcccggttcctatg
gacagaggtgcaggaagccttcaggactctcctgtaggatcatctgggccagctgctatc
gaacggccacaagtgcccatggtagacccacgggctcctatgcgaggagcgccaccagga
cctcaagggattccaccgagaggtcttctgggtgatgggcctaatgatccacgaggtgga
tcactagtaaatgtgggaggagaagtagtggagccccgtggttatatgggaggtcctcca
ccacaccaaggcccacccatgcatatgggccctccagaaatgcgtggaccccatgacatg
agaggggcaccaatgttgggagagcccaggggccctatgatggatcagcgtggtccaccc
atggactctagaggccaaattcctccaggccgcgatcctcgagctgtagaaactcggggt
cctgcggcaggccagagggtcccagtagcaggtggaatgcagggtgctccttctcacgca
atgccttcaaatgctccgccatctgcccgacctggtcctgcatctgaggtgtcttcacaa
gatcacgaaaaggctgctttaatcatgcaggtactccagctgacccccgaacagatcgcc
atgcttccccctgagcagaggcagagtatcctcatcctgaaagagcagattcagaaaact
gctggtgccccttga
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