KEGG   Silurus meridionalis (southern catfish): 124385820
Entry
124385820         CDS       T08004                                 
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A
  KO
K17906  autophagy-related protein 2
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04136  Autophagy - other
smeo04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124385820 (atg2a)
   04136 Autophagy - other
    124385820 (atg2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124385820 (atg2a)
   03029 Mitochondrial biogenesis [BR:smeo03029]
    124385820 (atg2a)
Membrane trafficking [BR:smeo04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    124385820 (atg2a)
Mitochondrial biogenesis [BR:smeo03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    124385820 (atg2a)
SSDB
Motif
Pfam: ATG2-VPS13_C Chorein_N VPS13_DH-like ATG2_CAD
Other DBs
NCBI-GeneID: 124385820
NCBI-ProteinID: XP_046705141
LinkDB
Position
5:18251016..18277356
AA seq 2008 aa
MSRWLFPWSGSIKKRACRYLLQHYLGHFLEERLSLDQLSLDLYNGSGVIKEINLDVWAVN
ELLESLAAPLEIVEGFVQSIKVTIPWAALVTDHCTLEVTGLQITCRPKDRTSGAWDSQGW
SSCMTSSMQLAKECLKDPPEASEEPPAPLEGLEMFAQTIETVLRRIKVTFLDTIVRIEHH
PLDSKDGIALEMQIKRLDYCDEAVRDSSQTVPVDIHQPPAFLHKILQLNSVQLFYETLGE
PQSLIPEHTVVSEDEERDYAPKPLRPHPGPLLIGSCSGFMETTVKIKQNDMLPGPKLELD
GKVGCLHLLLSPSQITNLMDLLTALCIETEGSSNMHGGGGGSSHSRPLGSDDLRLIEEDL
SKQISVDTVDQDLKLNTETYVSTLENGEMFYSMVPGCMTSSMMSNRSGSELSDSDMESSV
HSQSSLASTNPLSPQGILNCPRRYPVPGTLSSLPQCSRPPRHSTHTGQSEPMKPDCLLRL
TLGGLTLTLLEQEPAQDPGDLSTMAKVSQLFFHELAFFKDSMFSERDFENLRGSFAKACP
HSHLRLTGAAVQVACEMRSSGRHAHSMTSDLSFSRLELLECLWEPGKIEYTELLQFKNAG
HFTVGATARPCAQIHHSLTEKQQRKSGSKQRVMRRESSLRVELGELTTEIDLDILGRLDN
IIHALSHCPTQPNKPANTKPHLSELQSSLVLLSPYAVMKLRFPIPDLRPSDQRRPIREQA
VRKEVLSLEMCNLELKSHQGSDLQQQGPYTSTAKLTKVLEASFSDLHGVYEGWEGVSFPC
IRVQKGSNAENPDSTPKIVVHVSGAADSDGRGTVGVGLNRDLGLGFVSMENPCELREKNS
SPFSSNRTMFETEEMVIPADPEEMNEFQAQCVAQSQYVVDITLPLAYILLPSKEAFQSIY
NRINNDLLMWEPPLPHQPPPKMSHSPLQQRRSEDDEFQLCKSAFRLDSDSEEDEPQVCLA
SEQRKRGQPEPQPNHELSFLCLTVLVGKGRLQTLTDSKNEAGRRVEQFHGELLLDFEDGK
IFSVTQHQNDPNLNFLTIESKKVELYHKAEVPDSPIPARLEMPKFTPPNHLDLTIYPTEV
GVSSVGRREAGGQMLSTAIKITLDLQRNVKEFLVALRLQGATLRHRMALTNYSWHEQLVD
FLDVIDDDILGYTPPAIITVLHTHLVTCAVDYRPLYLPLRVLFTAESFSLSSNIIVDTAT
FHLRFILDDSALYLTDKCESETVDLKRDYVCVLDIDLLELAITTWKGNNTGKLTQPLFEL
RCSNNVVHVHSCADSCAALVNMLQYLISQGDLHPPPRHTSPTEIAGQKLPLSEAPTTLPP
CPPAETAEINQCDLTDALIDTERTLPEADREFGSPSSVKRGSPISVYLFPGEGPKSSSSA
LDGDESDLDQLVVTATEVHADMMLEECSECSTDNDDFCILEAPGIGIPPKDGEPVVKVLC
ESPIKVRDGYFSRPRGSSDLLRAPAHFAMPQSRVVLREVSVVWHLYGGKDFGGKPTSVHT
QHSHRGRAAPVGAHGSPSRSSGSSRPQNSWRWVGGSGRQHSLLMEIQLTKVSFQHESYPV
VVPTAGSGQDVDAAGLGEQPLSRQVFIVQELEVRDRLASSQMNKFLYLYTSESMPRRAHS
NMLTVKALQVLPESGLGGPECCLRISLLPLRLNIDQDALFFLKDFFSSMTAGINPYLPVD
PAAEVKADTTQKPSEEAEFGTGLGPDLTTSVETTYSEQSSSSAGSSSSSDQPIYFREFRF
TSEVPIWLDYQGKHVAIEQGTFAGILIGLAQLNCSELKLKRLCCRHGLLGVDKVIQYAVN
EWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWMPIEQYRKDGRIIRGLQRGAASFG
TSTASAALELSNRLVQAIQATAETVYDILSPTPPLTRCIAEGRPATRPRRTPQPADLREG
VAKAYDTVREGVIDTAQTLCDVASRGHEQKGLPGAVGGVLRQIPPTVVRPLIVASEATSN
LLGGMRNQIKPDARKEDFLKWRTEDSQE
NT seq 6027 nt   +upstreamnt  +downstreamnt
atgtctcggtggctcttcccttggtcgggctcgataaagaagcgggcctgtcgctacctt
ttacagcattacctcggccacttcttggaggaacgtttgagtttggaccagctgagtttg
gacttgtacaatggcagcggtgtcattaaagaaatcaacctcgacgtgtgggcagttaat
gagctcctggagtcccttgcagcccctctggagattgtagaaggttttgtgcagagtata
aaagtgacaatcccatgggcagcacttgttactgaccactgcacacttgaagtcactggg
ctacagataacatgcagacccaaggacagaaccagtggtgcctgggactcccaaggctgg
tcttcatgtatgacttccagcatgcagctggccaaggagtgtctgaaggacccacctgag
gcatcagaagaaccgcccgctcctttagaggggctggaaatgtttgcacagactattgag
acagttctgcggcggataaaagtcacttttttggacactatagtaagaattgagcaccat
cctcttgactctaaggatgggatcgccttagagatgcaaattaaacggctggattactgt
gatgaagctgtgagggactccagtcaaacagtgcctgtagatatccaccagcctccagcc
tttctgcataaaattctccagctcaactctgtacagctgttttatgagactcttggagag
ccacagagtcttattcctgaacatactgtggtcagtgaggatgaagagagagactacgca
ccaaagcccttacggcctcatcctgggcctctactcattggaagctgctctggtttcatg
gagaccactgttaaaatcaagcagaatgacatgctcccagggcccaagctggagctagat
ggtaaggtgggctgtctacaccttttactctctcccagtcagattactaacctaatggac
cttctgactgcactctgcattgagacagagggcagcagtaacatgcatggtgggggtggt
ggtagttctcacagtaggccactgggttcagatgatctgaggttgatagaggaggacctc
agtaagcaaatcagtgtggatacagtagaccaagatctgaagctaaacacagagacttac
gtcagcactttggagaatggagagatgttttactctatggtgcctggttgtatgactagc
agtatgatgtctaaccgctcaggaagcgagctctcagacagtgacatggagtcttcagta
cacagccaaagcagcctggcttcaacaaaccctctgtctccacagggaatacttaattgc
cccagacgttatcctgtaccaggaaccttatctagtttgcctcaatgtagcaggccacca
cggcattcaacacacactggccagtcagaacccatgaagcctgactgcttgcttcggctc
actctgggtgggttgactctcactcttctggaacaggagccagctcaagatcctggagat
ctgtccacaatggctaaggtgtcacagctgttcttccatgagcttgctttcttcaaagac
agcatgttcagtgagagagactttgagaacttgaggggtagctttgctaaagcgtgccct
cactcacatctcaggctaacaggagcagctgtacaggtagcatgtgagatgcgtagctct
gggcggcatgcccattccatgacctctgacctgtccttcagcaggctggaactgctggag
tgtctgtgggagccaggcaagatagagtacactgagctactgcagttcaagaatgctggt
cacttcactgtgggagcaactgccagaccatgtgcccaaattcaccactccctgacagaa
aagcagcaacgcaagagtggatcaaagcagcgagtaatgcgtagggagagctcactacgt
gtagagctgggtgagcttaccactgagatagacctggacatactgggcagactggacaac
atcatacatgccctgagccactgtcccacacagccaaataagccagcaaacactaagcct
catttgtcagagctgcaatcgtcccttgttctcctctccccctatgctgtaatgaagctt
cgcttccccatccctgaccttcgaccttcagaccagagaagacccattagagagcaagca
gtgcgtaaagaggtcctgagtctggagatgtgcaatctagagctgaagtctcatcagggg
tcagatctacagcagcaggggccatacacctcaacagctaaactcaccaaggttttggaa
gctagcttcagtgatctgcatggagtgtatgagggctgggagggcgtatctttcccttgt
atccgagtacaaaagggctccaatgcagagaacccagacagcacacccaaaattgtggtg
catgtaagtggggcagcagactcagatggtagaggcactgtaggtgtgggtttaaacagg
gatttgggacttggctttgtgtctatggaaaatccctgtgagctacgagagaaaaacagc
tcccccttctcctctaaccgtaccatgtttgagacagaagagatggtaatccccgcagat
ccagaggaaatgaacgaatttcaggcgcagtgtgtggctcagagtcagtatgtggtggat
attacactccctttggcctacatccttttgcccagtaaagaagcctttcaaagcatctac
aacaggatcaacaatgatttgttaatgtgggagcccccacttccccatcagccccctcct
aagatgtctcacagccccttacagcagcgcagatctgaggacgatgaatttcagctctgc
aaatcagccttcagacttgattctgactcggaagaggatgaaccacaggtctgtttagcc
agtgaacaaaggaaaagagggcagcctgagccccaaccaaatcatgagcttagttttctc
tgcttaactgtactggttggcaagggtcgtctgcaaactctcaccgacagtaagaatgaa
gcaggacgcagggtggaacagttccatggagaattgctgctagactttgaagacgggaag
atttttagtgttacccagcaccagaatgatccaaatctaaactttttgactatagagagc
aaaaaagttgaactctatcataaagctgaagtcccagactcccctatcccagcacgacta
gaaatgcccaagtttacacccccaaaccatctggacctgaccatttatcccacagaagtg
ggggtgagcagtgtggggcgcagagaagcaggtggtcagatgttgtctactgctatcaaa
attacactagacctccaacgcaatgtcaaggagttcctggttgcattacggctccagggg
gctactttaagacatcgcatggcattaacaaattacagttggcatgagcagttggtcgat
ttcctggatgtcattgatgatgatattttaggatacacacctcctgccatcatcacagtg
ttacatacgcacctggttacttgtgctgttgactacaggcccctctatcttccattgcga
gtgttgtttacagcagaatcgttttctctgtccagtaatatcattgtggacactgccact
tttcacttgaggttcatcctggatgactctgcattgtatctcactgataagtgtgaaagt
gagacagtggatttgaaaagagattatgtgtgtgtgttagacattgacctgttagagctg
gccataactacctggaaaggcaacaacactggcaaactgactcagccactgttcgagcta
cgctgttcaaataatgtggttcacgtgcactcttgtgcagactcctgtgctgctttagtg
aatatgttacagtacctgatctcccaaggtgaccttcacccacctcctcgtcatacttct
ccaactgagattgctggacagaagctcccgctctcagaagctcctacaactttaccacca
tgtccaccagcagagacagctgaaattaaccagtgtgatcttactgatgctctgattgac
acagaacgaacgctgccagaagcagatagggaatttggctctccttcctcagtaaagcga
ggctcacctatctcagtgtatttatttcccggggaaggcccaaaatccagctcctctgca
ttagacggggatgagtctgatcttgatcaactggtggttacagctactgaagttcatgct
gatatgatgttggaggaatgttctgaatgttccacggacaatgatgacttctgtatttta
gaggctcctggaataggcattcctcctaaagatggagaaccggtggttaaagtgttgtgt
gagagtcctataaaggtgcgtgatggctatttctctcggccacggggcagctcggatttg
ctacgtgctcctgctcactttgctatgcctcagagcagggtagtactccgagaggtatca
gtagtctggcatctctatggaggcaaagactttggaggaaaaccaacctctgttcacact
caacacagtcacaggggccgggcagcacctgtaggagcccatggttctccttcacgctct
tctggttcttctagaccacagaactcatggcgctgggtgggaggcagtggcagacagcac
tcactgctcatggaaatacaactgacaaaggtcagttttcaacacgagtcctaccctgtg
gttgtgcctactgcaggctcagggcaggatgtggacgcggcaggcttgggagagcagcct
ctctcacggcaggtgttcattgtgcaagaactagaggtgcgtgacaggctagcctcctcc
cagatgaacaaattcctctacctgtataccagcgaaagcatgccgcggagagcccactcc
aacatgttaacagtaaaggctctgcaggtacttcccgaatctgggttaggaggaccagag
tgctgcctaagaatcagcctgctgccccttcgactcaacattgaccaagatgcccttttc
tttctgaaagacttcttcagtagcatgactgctgggattaatccgtatttacctgttgat
ccagctgcagaggtgaaagcagacactactcagaaaccatcagaggaagcagagtttggt
actggtctgggtcctgatctcaccacttctgtagagacgacgtatagtgagcagagctct
tcctctgctggctcctcctcttcctctgaccagccaatttatttccgagagttccgtttc
acctcagaagttcccatatggctggactaccaagggaagcatgtggccatcgaacaggga
acatttgcagggattcttattggcctggctcaactgaactgctcagagctgaagctgaag
aggctgtgctgtagacacggactgctgggtgttgataaagtcattcaatatgctgtgaac
gagtggctcactgacatcaggaagaaccagttaccaggcatactgggaggtgttggtcca
atgcactctgtggttcagctgtttcatggggtacgggatctgttctggatgccaattgag
cagtacaggaaagatggacgtattattcgtggtctccagagaggggcagcgtcctttggc
acttctacagcttcggctgctctggagctaagcaacagactggtgcaagccatacaggcc
acagcagaaacagtgtatgacatcctgtccccaactccacccctaactcgctgcatcgca
gaagggcgccctgccactcggcctagacgcaccccacaaccagctgatctcagagaaggt
gtggctaaggcctatgacacagtcagagagggagtaatagacactgctcagaccctgtgt
gatgtggcctcccgtggacacgagcagaaaggtcttccaggagcagtgggcggggttctg
cgtcagatccctcccactgtggtgcgtcccttaatagtagcctctgaagccacctccaat
ctgcttggaggcatgcggaaccaaatcaaaccggatgcacggaaagaggactttttaaaa
tggcgcacagaagacagccaagagtga

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