Silurus meridionalis (southern catfish): 124385821
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Entry
124385821 CDS
T08004
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04068
FoxO signaling pathway
smeo04110
Cell cycle
smeo04218
Cellular senescence
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124385821 (tgfb5)
04350 TGF-beta signaling pathway
124385821 (tgfb5)
04068 FoxO signaling pathway
124385821 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124385821 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124385821 (tgfb5)
04218 Cellular senescence
124385821 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124385821 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124385821 (tgfb5)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Transforming growth factors (RSTK binding)
124385821 (tgfb5)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Growth factors/receptors
124385821 (tgfb5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
Motif
Other DBs
NCBI-GeneID:
124385821
NCBI-ProteinID:
XP_046705143
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Position
5:18284037..18288898
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AA seq
413 aa
AA seq
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MWFINIALLILKLSVSAEGFSTCQSYDLDDHKSKRIEAVRGQILSKLRIRSPPDSAAPPQ
PESVPFEVMLLYNSTKDLLKERARHAECERESSEEDYYAKEVQRVDMLPQRPDPNAINTV
PQSPYFRVVKFDVTNVDRNSSTLVKAEFRIYRVQNTHARATDQRVEIYQILKSDDITGST
HRYIDSRIVQPRAKGAWLSVDVTETVKEWMAYKEKNLGLMLSVHCPCCTFVPSTNNIMPN
KSEELEARFAGVDDDLNRPNRRPGLTKGQIEFSTKTPHLILTLLPTDRLENPNKKNRKKR
AAADATTCSRNADQGCCLRSLYIDFRRDLNWKWIHEPKGYKANFCAGNCPYLWSADNHYN
MILPLYNKMNPEASASPCCVPQDLEPLTIVYFLGRTPRVEQLSNMVVKSCKCR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcatcaatatcgcgctgcttatcctaaagttatccgtgtcggctgagggcttt
tcgacgtgccagtcttacgacttggacgatcacaagtccaagaggatagaggcagtgcgc
ggacagatcctgagcaaactgcgtatccgatctccaccagattccgcagctcccccgcag
cccgaatcggtgcctttcgaggtcatgctgctttataacagcaccaaggacctgctgaag
gagcgcgcgcgccatgccgagtgcgagcgcgagagcagcgaggaagattactacgctaaa
gaggtgcagcgagtggacatgctgcctcagcgccccgaccccaatgccataaacacggtg
cctcagagtccatacttcagagtggtgaagtttgacgtcaccaatgtagacagaaattct
agcacacttgtcaaggcagagttccgcatatacagggtgcagaacacgcatgcacgagcc
acggatcagcgagtcgaaatataccagattctgaaatctgatgatattacaggttccact
cataggtatatagattccagaatcgtacagccacgagccaagggggcatggctgtcggtt
gacgtcacagagactgtgaaagagtggatggcttataaagagaagaacttgggcctgatg
cttagtgttcattgtccatgctgcacatttgtcccatccacaaataatattatgcccaac
aagagtgaggagttggaagctcgatttgcaggtgtagatgatgacctgaatcgccctaac
cgcaggccaggtctgactaaaggccagatagagttcagtactaaaacaccacacctcata
ctgaccctgctgcccacagatcgtttggagaaccccaacaaaaagaaccgcaagaagagg
gcagccgctgatgctacaacatgctccaggaatgcagatcaaggctgttgtttaaggtct
ctgtacattgacttccgtcgggacctaaactggaaatggatccatgaaccgaaaggatac
aaagctaatttttgtgctggcaattgcccgtatttgtggagtgcagacaatcattataat
atgattttgccactttataacaaaatgaatcccgaggcatctgcatccccctgctgtgtg
ccccaggacctggagcctctcactatcgtttatttccttggtcggactccacgggtggag
cagctctcaaacatggtggtcaaatcctgcaaatgccgctga
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