Silurus meridionalis (southern catfish): 124385827
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Entry
124385827 CDS
T08004
Symbol
polr1d
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1
KO
K03020
DNA-directed RNA polymerases I and III subunit RPAC2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03020
RNA polymerase
smeo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124385827 (polr1d)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124385827 (polr1d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124385827 (polr1d)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124385827 (polr1d)
RNA polymerase I system
RNA polymerase I
124385827 (polr1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
DUF1686
Motif
Other DBs
NCBI-GeneID:
124385827
NCBI-ProteinID:
XP_046705153
LinkDB
All DBs
Position
5:9881198..9895306
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AA seq
170 aa
AA seq
DB search
MPTITPLAEKSVISVDDVYNVFGEGWSVTRCYVAMVTGLNIGETSSLSDSFSVTSMAGID
IEKKPVLEMVQADGADEGCVTFVLHEEDHTLGNSLRYMVMKNTEVEFCGYSITHPSESKI
NFRIQTRGGLPATEPLRKGLNDLTDVCKHVLHTFEAQIKDFRQQQGEAME
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaattactcctttagcggaaaagtcggtcatcagcgtggatgatgtttataat
gtgtttggtgagggttggagcgtcacgcgctgttatgttgctatggtaaccgggttgaat
attggtgaaacgtcatcactgagcgacagcttcagcgttacaagcatggctgggattgat
attgaaaagaaaccggttttggagatggtgcaagcggatggtgcagatgaaggatgtgtg
acatttgtcttgcatgaagaggaccacacactgggcaattctctcagatacatggtcatg
aagaatactgaagtggagttttgtggctacagcattacacacccatcagagagcaagatc
aacttccgcatacagactcgaggaggcctcccagcaaccgaacccttacgcaagggcttg
aacgacctcactgatgtctgtaaacacgtcctgcacacatttgaggcacaaattaaagac
ttcagacaacagcaaggagaggcgatggaataa
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