Silurus meridionalis (southern catfish): 124385833
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Entry
124385833 CDS
T08004
Symbol
rab33ba
Name
(RefSeq) RAB33B, member RAS oncogene family a
KO
K07920
Ras-related protein Rab-33B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124385833 (rab33ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124385833 (rab33ba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124385833 (rab33ba)
04031 GTP-binding proteins [BR:
smeo04031
]
124385833 (rab33ba)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
124385833 (rab33ba)
Others
Specific organelles associated proteins
Auto phagosome
124385833 (rab33ba)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124385833 (rab33ba)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
124385833 (rab33ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
SRPRB
G-alpha
PduV-EutP
ATP_bind_1
Septin
AAA_22
TniB
AAA_25
AAA_24
Motif
Other DBs
NCBI-GeneID:
124385833
NCBI-ProteinID:
XP_046705163
LinkDB
All DBs
Position
5:3556916..3562298
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AA seq
231 aa
AA seq
DB search
MESSLEFSSSLTSSTLPPPRTRIFKIIVIGDSGVGKTCLTYRFCAGKFPDKTEATIGVDF
REKVIEIDGEKIKVQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDVTSAASFRSLPAWIE
ECRQHALGHEVPRILVGNKCDLRHAAQVSTEVAQQFADAHSMPLFETSAKSPQGGSNDSD
HVEAIFMTVAHKLKSQKPLMLSQPANTVTLRGRDQEEEEQRGSWGCGCWRS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttctctggagttcagcagctccctgaccagctccacactgcctcctccccgc
acccggatctttaagatcatagtgatcggagactccggggtgggaaaaacctgcctgacc
taccgcttctgcgccggcaagttccccgacaaaaccgaggccacgatcggggtggacttc
cgcgagaaggtgatcgagatcgacggcgaaaagatcaaggttcagctctgggacacagcg
ggtcaggagcgtttccgtaagagcatggtgcagcactattacagaaacgtccacgccgtg
gtgttcgtgtacgacgtgacgagtgcggcgagtttccgcagcctccccgcctggatcgag
gagtgcaggcagcacgcgctcggccacgaggtgcctcggatcctggtgggcaacaaatgt
gacctgcgtcacgccgcccaggtgagcaccgaggtcgcgcagcagttcgcagacgcccac
tccatgcctctgttcgagacgtccgctaagagtcctcagggagggagcaacgacagcgac
catgtcgaagccatcttcatgacggtggcacacaagctgaagtcgcagaagccgctcatg
ctgagccagccggccaacacggttacgctgagggggcgggaccaagaggaggaggagcaa
cgcgggagctggggctgcggttgctggaggagctaa
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integrated database retrieval system
