Silurus meridionalis (southern catfish): 124385858
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Entry
124385858 CDS
T08004
Symbol
shank2b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2b isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
smeo
Silurus meridionalis (southern catfish)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_3
SAM_2
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
124385858
NCBI-ProteinID:
XP_046705233
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All DBs
Position
5:23844146..24014977
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AA seq
1810 aa
AA seq
DB search
MPRSLMSSEEEMAQSFSDSGSSESDSLRDEQPCVERPSSSRGDSLLICVVIPDLQQSRSM
RFKADCTVWAAKQQILCTLTQSLRDVLNYGLFQPAVDGKESTFLDEEKLIRDHTFPSNND
VPTLEFRYKSRVYQHANINEKQIEKLHTQANLKKFLEFVQHHQVDKVTKLLERGLDPNYH
DSDTGETPLTLAAHLDNMVEMIIALKNGGAHLDFRSRDGMTALHKAVRAKNQITLKALLE
LGASPDYKDGQGLTPLYHTVTVGGDPSCCEVLLHAQATLTCHDENGWHEIHQACRYGHVQ
HLEHLLFYGADMRVQNASGNTPLHICALYKQENCARVLLLRGASKEVKNYRGQTPFQVAI
IAGNFELAEFIKSHKDDSIVPFREAPTAVVVSSGRSRPQQPQAGRSTLAAPRVLLRSNSD
NNLNVNKLSAPHTPSRSPSPLRSLSPRRPQQMQNSSNGTVKSMGRGARHPPRSRSPSLGR
LGDGDARRHPPQRHSSPRPGRDAFSGAETPGSKRRMYSAVPGRHYMVVKSYQPQAEGEIA
LYKNDRVKVLSVGEGGFWEGSARGNVGWFPSECVEEIPNKANEDRPYARADRSERRKLFR
HYTVGSYDSFDASSDCVIDEKTVVLQKKDNEGFGFVLRGAKADTPIEEFSPTPAFPALQY
LESVDEGGVAWQAGLRTGDFLIEVNKDNVVKVGHKQVVNMIRHGGNHLIIKVVTVSRNLD
PDDTARKKAPVLPRRAPSTALSTRSKSMTSELEDLVDKATLRKKKDKVEEVVPPQKPVWD
NANVDVRVAAVKPRPTSRCFAVASEMNSLCNSQEMSVDSAPVTATPKGPFLGIPKGAIRR
QTSIGVTEEEKQFLTPPMLKFTRSLSMPDTSEDIPPPPAISPPSPPHNNAPTPAGHGYGT
IRPGFTPQSPTVNNAPSDRGDSSPGPGWRDQGMYYQKNSEQYDAKDYSNSPTAQQSLHMR
RAQIPENPYSDVGKLANAALFVPNKPARRKGMLVKQSNVEDSPEKTCSIPIPTIIIKEPS
TSSSGKSSQGSSMEIETSTPDHPGQLRPDDGINTGSPFAPAIASSSGREKRLEVHRNSPS
FRSTDAGDEDVAPAPTPRLRHSKSIDEGMFSSDERLRRLMAPPSSLLSIPRGGGNVTDFN
SPEPTMVRELLNTRTGHSPISLPAHKTYSSGSGNYVHPVTGKPLDPNSPLALALAARDRA
MREQSQPLPLKSDPSKLDLNKPLFIDTKLRPNVEVSFSSTATMGRPRGGLRRQMTESKFE
TESKFQLDLGKIEKRPEEKKNMLIDIVDTSQQKSAGLLMVHTTDGTKTEENSLSEGERDE
DVCPDSTPGELRDPNQPVPSKPAPLKPLSVVPPKTMISVSSVDEPVKLPFGIPPPPLASV
DIDEEFVFAEPLPPPLEFANSFDIPEDQGALSELLKQKSNGMSVSGPTLAPYYPHLTTSN
SRDQEIKRPTVLTNCTPPSFPTGPLEPYEPIIDSGIEVDSRSSGDPQLETTSTVSTVSSI
STLSSEGGETLDTCMVYADGQAFLVDRAQVLPKPKAKYAVNKSNALYKDALNEETISSFR
VPSSIPPPPLGTAPPEPLKTPTQRTSKLWGEPLDLKTPHGPETKPQGLTEINSVLQHVSK
DKAPKPEEALDSPPGCRTHFGLRNQDSVSLISGTQPNPGVSFTNQPGPNVPAPSPCRQAE
SLHHHRHPSSPSLTSPPPILSCSSSSSSLPAVSTTSSVQGRSRSPSPLSFLQAASGKPFA
SKAVLSWTKQDVADWLESLNLAEHRDAFLENDIEGTHLPSLQKQDLIDLGVTRVGHRMNI
ERALKLLLDR
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggagtctcatgtccagtgaggaggagatggctcagagtttctccgactcaggc
agctcggagtcagacagcttgagagacgagcaaccatgtgtagagcgaccgagtagcagc
cgcggtgactccttactcatctgcgtcgttattcctgacctgcagcagtctaggtccatg
aggtttaaggctgattgtacagtctgggcagccaaacagcagatcctgtgcacactaacg
cagagtctgcgagatgtgttgaactacggcctctttcagccggctgtggatgggaaagaa
agcaccttcctggatgaggaaaagctcattcgagatcacaccttcccttccaacaacgat
gtgcccaccctcgagtttcgctacaagagccgagtgtaccagcatgccaacatcaatgaa
aagcagattgaaaagcttcatacgcaggccaacctgaagaagtttctagaatttgttcag
catcatcaggtggataaagtgaccaagctgcttgaacgaggtctcgaccccaattaccat
gactcagacaccggagagacacctttgacactggctgcccatctggacaacatggtagag
atgatcatagcgctgaaaaatggaggcgctcatttggattttcgctcccgagatggcatg
accgcgctgcataaagccgtccgagccaagaaccagatcactcttaaggccttgctggaa
ttaggtgcgtctccagactataaagatgggcagggtctgactccgctctaccacaccgta
actgtagggggcgacccaagctgctgcgaggtgttactacatgctcaagccactttaact
tgccacgatgagaacggctggcacgaaatccatcaggcttgtcgatatggtcatgtccag
cacttggagcacctcctgttttatggagctgacatgcgtgtccagaacgcctctgggaac
acacctctccatatctgtgccctctacaaacaggagaattgcgccagagttttgctgctt
cgtggagccagcaaggaggtgaagaactaccgtgggcaaactccttttcaggttgccatc
attgcagggaactttgagctggctgagttcataaagagccacaaagacgacagcattgtg
cccttccgggaggctccgacagcagtggtggtgagctcgggcaggagcaggcctcagcag
cctcaagcaggccgcagcactctggccgcacctcgtgtgctcctgcggtcaaacagcgac
aacaacctgaacgttaacaagctctctgcgccacacacgccctcgcgctcgccctcgccc
ctgcgcagcctgtcaccccgcaggccccagcagatgcagaacagctccaatggcacggta
aagagcatgggccggggggccaggcaccccccgcgcagccgctcaccctcgctgggccgc
ctgggggacggcgacgcccgcagacatccgccccagcgccacagcagtccacgtcccggg
cgtgatgctttctctggagcagagactccagggtccaagcggcggatgtacagcgccgtg
ccagggagacactacatggtggtgaagtcttatcaacctcaggctgagggagaaatcgcc
ctgtacaagaacgacagagtcaaagtactcagtgttggtgaagggggattctgggaggga
agcgctcgaggtaacgtcggttggtttccttctgaatgtgtggaggaaattcccaacaaa
gctaacgaggatcgaccctacgctcgagcggaccggtcggagaggcggaagctctttcgg
cattacacagtgggatcctatgacagctttgatgcttcgagcgactgcgtcatcgacgag
aagaccgtggtcctgcagaagaaggacaacgaaggtttcggcttcgtgctgagaggggcg
aaagctgacaccccgatcgaggagttcagcccgaccccagcctttcccgccctgcaatat
ctggagtctgtggacgagggtggggtcgcatggcaggccggactacgcactggagacttc
cttatcgaagttaacaaagacaacgtggtaaaggtgggccacaaacaggtggttaatatg
atccggcacgggggaaatcatctcatcattaaagtcgtgaccgtcagcagaaatctcgac
cctgatgatacggctcgaaaaaaagctccagtccttccaaggagagctccatcaactgcc
ctttccactcgctccaaatccatgacctcagaactggaggacttggtggataaagctact
ttgaggaaaaagaaggataaagtcgaggaggttgtcccgccacaaaagccagtgtgggac
aacgcgaacgtggacgtgagggtggcagctgttaaaccgcgccccacaagcaggtgcttt
gccgtggcctcagaaatgaattcactgtgcaacagccaggaaatgtcagtggattctgca
ccagtaacagccactcctaaaggcccattcctgggtataccaaaaggagccattcgccga
cagacatctataggtgtaactgaagaagaaaagcagtttcttactcctcccatgttaaaa
tttacaagaagcctatctatgcctgacacatcagaagacatccccccaccaccggctatt
tcccctccatctcctccccacaacaatgcccccacacctgctggacatggttatggcaca
atccgaccaggcttcacccctcaaagtcctactgtgaacaatgctccttcagacagagga
gactcaagtcctggtccaggttggagagaccaaggcatgtattaccaaaagaattctgaa
cagtatgatgctaaagactacagcaacagtccaactgctcagcagagccttcacatgcgc
cgagcccagattcctgagaacccatattcggacgtcggcaaattggcgaatgctgcactg
tttgttccaaacaagcctgcacggagaaagggcatgcttgtgaaacagtctaatgttgag
gatagcccagagaagacctgctccattcccatacccaccatcatcatcaaagagccttcc
accagcagcagtggaaaaagcagccagggcagcagtatggagattgaaacttcaacgccc
gaccacccaggccaactccgccctgacgatggcattaatacaggaagcccttttgcacct
gccatagcttctagttccggcagggaaaaacggctggaggttcacagaaattccccatcg
tttagatccacagatgctggtgatgaggatgtggctcccgctcctacccctcgtctgcga
cactcaaagtccattgatgagggcatgttcagcagtgatgagcgtctacgccggctcatg
gctcccccttcatccctgcttagcatcccccgaggagggggcaatgtaacagactttaac
agccccgagccaaccatggtgcgggagttactcaacactagaacaggtcacagtcccatt
agcctgccagctcacaagacctacagctcagggagcgggaactatgttcaccctgtcacc
ggaaaaccgctagaccccaattctccattagccttagcattagctgccagagaccgggcc
atgagagagcagtcacagcctttgccacttaagagtgacccgtccaaactggatctcaac
aagccactttttattgacacaaaacttcggcccaatgttgaagtaagtttttccagcact
gccaccatgggcaggccacgggggggcctacgaagacagatgacggaatccaaatttgaa
actgagtccaagttccagcttgacctgggcaagattgaaaaaaggccagaggagaaaaag
aacatgctgatagacattgtggacacatcccaacagaagtcggcagggctgctaatggtt
cataccacagatgggaccaaaactgaggagaacagcctgtcagaaggagagagggatgag
gatgtttgtccagatagcacccccggagagcttcgtgatcccaaccagccagttccttct
aagcctgcaccactaaagcctctctctgtagtgccaccaaaaaccatgatctctgtcagc
tctgtagatgagcctgtcaaacttccctttggtatccctccaccacctctggcctctgtt
gacattgatgaggagtttgtgtttgccgaacccctgcctccaccgttagagtttgctaac
agttttgacatccctgaagaccaaggggcactcagtgaacttctgaagcagaaatccaat
ggcatgagtgtgagtggaccaacgcttgcaccttattacccccatttaaccacaagcaac
tcaagagatcaagagatcaaaagaccaactgttctcaccaactgcacacctcccagcttt
cctacaggacctctggaaccttatgagcccattattgactcaggcattgaagtggacagc
cggagcagtggagacccccagctggagaccacaagtacggtctccactgtatcgagtatc
tccaccttatcgtcagaaggaggagagaccctggacacttgcatggtctatgcagatggt
caggcctttctggtggacagggcacaggtcctacccaaacccaaagccaagtatgctgtc
aacaagagcaacgcactttacaaggacgccttaaacgaggagaccataagctctttcagg
gtgccctcctcgatccctccaccacccctgggaactgccccaccagaacctctaaaaacc
ccaacacaaagaacctcaaagctttggggtgaacctctggatctgaaaaccccacatgga
ccagagacgaaaccccaaggcttgacagaaataaattctgttctgcaacatgtcagcaaa
gacaaagcaccaaagccagaggaagctctagactctcccccaggatgtagaactcatttt
ggattgagaaatcaggacagtgtgtccctcatctcaggaacccagccgaaccccggagtg
tccttcaccaatcagcccggtccgaacgtgcctgcgccatcgccatgccgacaggctgag
agcttgcatcaccatcgccatccctcgagcccgagcctcacatctcctcctccaattctg
agctgctcctcgtcatcctcctctctacctgccgtgagcaccacgtcctcggtacagggc
cgaagtcgctcaccttcgcccctctcgttccttcaggccgcctccggcaagccattcgcc
tccaaggcggttctttcgtggaccaaacaggacgtggctgactggctagaaagcctcaac
ctggctgaacacagagacgccttcctggagaacgacatagagggcacacacctgcccagc
ctgcagaaacaggacctaattgacctaggagtgacacgcgtcggccatcgcatgaacatc
gaacgtgcactcaagctgctgcttgacagatga
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integrated database retrieval system
