Silurus meridionalis (southern catfish): 124385926
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Entry
124385926 CDS
T08004
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04810
Regulation of actin cytoskeleton
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124385926 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124385926 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124385926 (cyfip2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124385926 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
124385926 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
124385926
NCBI-ProteinID:
XP_046705385
LinkDB
All DBs
Position
5:14090742..14130668
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVQAIEDFHKHSFFY
THLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDH
AISRFESEDLTSIVELEWLLEINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDSVWRGPPPSNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccatgtaactttggaggatgcgctgtccaacgtggacctgctggaggagctg
ccactccccgaccagcagccatgcatcgagccgccaccctcctctattatgtaccaggca
aactttgataccaactttgaggacagaaatgcttttgtgaccggtatcgcccgatatatt
gaacaggccaccgtccattccagcatgaatgaaatgctggaggagggacatgaatacgct
gtcatgctgtacacctggagaagctgctcgagagccattccccaggttaagtgtaatgag
cagcccaacagagtggagatatatgagaagactgtggaggtgctggaacctgaagtcacc
aagctcatgaagttcatgtactttcagcgtaaggcgattgagcgcttttgtagtgaggta
aagcgcctgtgtcacgctgagcgcaggaaagactttgtgtctgaggcttacctgcttacc
ctgggcaaattcatcaacatgttcgctgttctggatgaactcaagaacatgaagtgcagt
gtcaagaatgaccactctgcttacaaaagagctgctcaattcctgagaaagatggctgat
ccacagtcaatccaagaatctcaaaacctttccatgttcttggctaatcacaacagaatc
acacagtgtctgcatcagcagctggaggtgatccctggctatgaagagctcctggcagac
attgttaacatctgtgtggactactatgagaataagatgtacttgacacccagtgagaaa
cacatgctgctcaaggtgatggggttcggactttatttaatggacggaaatgtcagcaac
atctacaaactggacgccaagaagagaataaacctcagtaaaatcgacaagttcttcaag
ctccaggtcgtgcctctgtttggtgacatgcagattgagctgtctcggtatatcgagaca
agcgcccactatgaggagaataaatcaaagtggacatgcacccagagcagtattagtccc
cagtataacctttgtgagcagatggtgcagatccgagacgatcacatccgctttatctca
gagttggcacgttacagtaacagcgaggtggtgacaggctctggcttggacagccaaaag
tctgacgaggagtacagagagctgtttgacctggcgctccgaggtttgcagctcctctcc
aagtggagcactcatgtcatggaggtgtactcatggaaacttgtgcaccccactgacaag
ttctgcaataaggattgtcctggcacagctgaggagtatgagcgtgccacacgctataac
tataccagtgaagagaaattcgccttggtggaagtaattgccatgatcaagggtctgcag
gtgctaatgggccgcatggagagcgtgttcaaccaggccatcaggaacacaatctatgct
gcactgcaggactttgcccaggtcactctgagagagccgctcaggcaggctgtgcgcaag
aaaaagaatgtcctaatcagtgttctacaggccattcggaagactatctgtgactgggag
ggaggcagggagccacccaacgacccttgtctaaggggagagaaggaccctaaaggaggg
tttgatatcaaagtgccccgccgtgctgttggtccctcaagcacacaattgtacatggtg
cgaacaatgcttgagtcgctgatcgctgataagagcggctcaaaaaagactctgcgcagc
agcctggatggtcccatagttcaggccatagaggacttccataaacactccttcttctac
acccatctcctcaacttcagtgaggcccttcagcagtgctgtgacctatcacagctttgg
ttccgagagttcttcctggagctcaccatgggtcgtcgcatccagttccccattgagatg
tccatgccctggatcctcactgaccacatcctggagaccaaagaaccctccatgatggaa
tatgtgttgtatcctttggacctttataatgacagtggctattatgctctaaccaagttt
aagaagcagttcctctacgatgagatagaggctgaggtgaacctgtgttttgatcagttt
gtatacaaattggctgatcaaatatttgcgtactataaagcaatggctggaagtgttctc
ctggacaaacgcttccgggcggaatgtaagaactacggagtgattatcccgtatccccca
tctaaccgctatgagacactgctgaaacagagacatgtgcagctcctgggtcgttctatt
gacctgaacagactgatcactcagaggatctcagcagccatgtacaaatccctggaccac
gccatcagccgctttgagagtgaagacctcacttctatagtggagcttgagtggttgctg
gaaataaatcgactgactcaccggctgctgtccaagcacatgaccctggacagttttgac
gccatgttccgggaagccaaccacaacgtgtccgctccatatggccgcatcacactgcat
gtcttctgggagctcaattttgacttcctgccaaattactgctacaacggctccaccaac
aggtttgtgcgcacagcaattccttttacccaagagcctcagcgagataaacctgccaac
gttcagccttactacctttacggctccaagcctctgaacattgcatactcccacatctac
agttcctacaggaactttgtgggtcccccgcatttcaaaaccatctgccgtctccttggt
taccagggcatcgctgtagtgatggaggagctgctgaaaattgtcaagagcttgctccag
ggcaccattcttcagtatgtgaagactctgattgaggtgatgcctaagatttgtcgtctg
cctcgtcatgagtatggatcaccaggcatcctggagtttttccatcaccagctcaaggat
ataattgaatacgctgagctgaagactgacgtgtttcagagtctaagggaggttggcaat
gcaatcctcttctgcctcctgattgagcaagctctgtcccaggaagaagtctgtgacctc
cttcatgcagcaccattccagaacattctcccgcgagtctacatcaaagagggtgaaagg
ttggaggtgaggatgaagaggctggaagcgaagtatgctcctctgcacttggttcctctc
attgaaagacttggcactccacagcaaattgctatagcacgagagggagacctgctgacc
aaggaaaggctgtgctgcggcttgtcaatgtttgaggtcatcctcacacgcatccgcagc
tttctacaagacagcgtgtggcgtggaccgccccccagcaacggtgtcatgcatgtggac
gaatgcatggagtttcaccggctctggagcgccatgcagtttgtgtactgcatcccagtg
ggaacgcacgagttcaccgcagagcagtgttttggcgatggacttaactgggctggatgt
gccatcatcgtgctgttgggacagcagcgacgcttcgacctctttgatttctgctaccac
ctgctgaaggtccagaggcaggatggcaaagatgagatcatcaaaaatgtgcccttgaag
aaaatggctgaccgcatccgaaagtaccagatcctcaataacgagatctttgccattctc
aacaagtacatgaaagctgtggagacggacagttctacagtcgagcatgttcgctgtttc
cagcctcctatacatcagtctctagcgaccacatgttaa
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integrated database retrieval system
