Silurus meridionalis (southern catfish): 124385953
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Entry
124385953 CDS
T08004
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124385953 (usb1)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
124385953 (usb1)
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Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
124385953
NCBI-ProteinID:
XP_046705421
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Position
5:23512529..23518963
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AA seq
268 aa
AA seq
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MLVSYSSSSEEENEVSNKRKQRKPESRVSGAKKRKQGSGQDSVPRLPLPSSVKEMFRDSE
EQHIEDSSQHGGRLRSFQHERGNWATYVYLQYEPDDVFLELLDELMGCAAARGVTLTRAE
EFHVSFSQTLILRHHWIQPFVQALRSALATCMGFVCLADKLKVYSNQEKTRTFLGMEIST
GNMQLLEVVKRVDAVMEKFNLSTYYEDPSFHLSLAWCVGDFTEKLQNTCLPELQSLVDGH
EDGPFQIRLNCKELRCKSGNKFFLFPLQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgttagttagttacagtagcagctcggaagaagaaaatgaagtttccaataaaagaaaa
caaaggaaaccagaaagcagggtttcaggtgcaaagaaaaggaagcaaggatcaggtcag
gactctgtgcctcgtcttcctcttccatcatccgtcaaggagatgttcagagactcagaa
gagcagcacatagaggacagctctcaacatggaggaagactccggtctttccagcacgag
agaggcaactgggctacttatgtttatctacaatatgagcctgacgacgtgttcctggag
ttgctggatgagctgatgggttgtgctgcagcccgtggcgtcaccttgacccgggccgag
gagtttcacgtcagcttctctcagacattgatcctgcgacaccactggattcagccattt
gttcaggcgctgcgttctgcactggcaacatgcatgggatttgtgtgtctagcagataaa
ctgaaggtttactccaatcaagaaaaaacgaggactttcctcggtatggaaatttctaca
ggtaacatgcagctacttgaggttgtgaaaagagtggacgcagtaatggaaaagttcaac
cttagcacttattatgaggatccatcgtttcacttgagtctggcgtggtgtgtcggtgat
ttcactgaaaaactgcagaacacgtgtttaccagagttgcagagtctcgtggacggccat
gaagacggaccttttcagataaggctgaactgcaaggagctccgctgcaagagcgggaat
aaattctttctgtttccgttgcagtga
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