Silurus meridionalis (southern catfish): 124385959
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Entry
124385959 CDS
T08004
Symbol
rnf103
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103 isoform X1
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124385959 (rnf103)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124385959 (rnf103)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124385959 (rnf103)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
Thioredoxin_6
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
124385959
NCBI-ProteinID:
XP_046705439
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All DBs
Position
5:9209892..9216317
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AA seq
655 aa
AA seq
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MWLKLFFLLLYFLVLFVLARFFEAVVWYETGIFATQLVDPVTLSFKKLKTILEGRGLGYS
GLAEKRDVRELVENSGELMQGELYSALKNEKEEAASDSSTSFSGEMHFYELVEDTKDGIW
LVQVIAQDRNPLLSTANWGKMVQKVSRFGIRTGTFNCSSDFRYCHKRGWMKSTLIMSVPQ
TYSSKGKVVLKEYNGRRIETEHIFKWMTAHVASRIKTIRFSQQLTDDWYQREKQPVKMFL
FAKLLQPPAFFSALSIKFTGRIDFIFVDVRNWDNTTCLEEIGVQHLPSYILKTPEGIYRY
GNSTGEYISLHAMDTFLRSVQPEVNDLFVLSLVMVNLMAWMDLFITQGATIKRFVVLIST
LGTYNSLLIISWLPILGFLQLPYLDSFYEYSLKLLRYADTTTLASWVRADWTFYSSHAGL
FLSTYLAHGLLIDYFEKKRRCSNEDQNANNLEWLSSLWDWYTSYLVHPIASFQNESDWDD
DPNFLLERLAFPDLWLRPLVPIDYIKNLPTWRFRCTRSKGTTRMDQDNPTNNTEHLSFMK
PGSEQQEHDNSSESANARSSSGMRSQESWSSEEEQDTDWSQWPCGMLHCTECVVCLENFE
TKCLVMGLPCGHVFHQQCIVVWLAGGQHCCPVCRWPSYKKRPARQPYADFPPEPE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaaactctttttcttgcttctttactttctggttctgtttgtcctggctcgt
ttttttgaagccgttgtgtggtatgagacggggatctttgccacgcagctggtggatcct
gtgacactgagctttaaaaagctgaagaccatcctcgaggggagagggctgggatactcc
ggcctggccgagaagagggacgtccgagagctggttgaaaactctggagaactgatgcaa
ggggagctctattcggctttaaaaaatgaaaaagaagaagcagcatcagattccagcacc
agttttagtggggagatgcacttttatgagttagtggaagacactaaggatggcatctgg
ttggtccaggtaatagcccaagacagaaatccattattgagcacagccaactgggggaaa
atggtacagaaagtttctcgctttggcattcgcactggtactttcaactgctcgagtgat
ttcagatattgccataagcgtggctggatgaagtccactctgatcatgtcagttcctcag
acttactcctctaaaggaaaggtcgtacttaaagagtataatggaagacgcattgaaacc
gaacacatcttcaaatggatgactgcacacgtggcctcgcgcatcaagacaattcgtttc
tcacaacagttaacggatgactggtatcagagagaaaaacagcctgtgaagatgttcttg
tttgccaaactgctccagcctcctgccttcttctcggctctcagcatcaaattcacaggg
cgcattgacttcatctttgttgatgttcgcaactgggacaacaccacttgcttggaggag
atcggggtgcaacatctgccctcatatattctcaaaacaccagagggtatttacagatac
ggcaacagcactggggaatacatttcattgcatgccatggacacattcctacgttccgtt
caaccagaggtcaatgatctatttgttctgagcttggtcatggttaacctgatggcctgg
atggaccttttcataacacaaggagccacgattaaacgctttgtggttctgatcagcaca
ctaggaacttataattctttactcatcatctcttggctcccgatacttggattccttcag
ctaccatatttggatagcttctatgagtatagtcttaaactgctgcgctatgcagacaca
accactcttgcctcttgggtcagggcagattggaccttctattcttcacatgctggactt
ttcctgagcacgtatctggcccatgggctcctcatagactactttgagaaaaagagaaga
tgcagcaatgaagaccaaaatgcaaacaacctagagtggttgtccagcctttgggattgg
tacaccagctatttggtacatcctattgcttcctttcagaacgagtcagattgggatgat
gatcctaatttccttttggaaaggttggcattccctgacctatggcttcgtcctcttgtt
cccatcgactacatcaaaaatctacccacttggaggttccggtgtacaaggtccaagggg
accaccagaatggaccaagataacccaacgaacaacacagagcacttgtcattcatgaaa
ccagggagtgagcagcaagaacacgacaacagttcagagagtgccaatgcaaggagttca
tctgggatgaggtcccaagagtcctggtcttctgaagaggaacaggacactgattggtcc
cagtggccctgtggcatgcttcattgcacagaatgtgtcgtttgtttagagaactttgaa
acgaaatgcctcgtcatgggactgccgtgtggtcatgtgtttcaccagcagtgcattgtg
gtctggctggcaggtgggcagcactgttgtccagtgtgtcggtggccatcttataagaag
agaccagcgagacaaccatatgcagattttccccctgaaccagaatag
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