Silurus meridionalis (southern catfish): 124385993
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Entry
124385993 CDS
T08004
Symbol
rnf145a
Name
(RefSeq) RING finger protein 145 isoform X1
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124385993 (rnf145a)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124385993 (rnf145a)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124385993 (rnf145a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_11
Prok-RING_4
zf-ANAPC11
zf-P11
Motif
Other DBs
NCBI-GeneID:
124385993
NCBI-ProteinID:
XP_046705505
LinkDB
All DBs
Position
5:complement(13582981..13615534)
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AA seq
638 aa
AA seq
DB search
MAVKERVESVLNVGLRVPSIMLLEVLYRWDVSSFFQKIQRSSMSNNPLFQYKYLALYLHY
VGYILSLVLLTLPRQRLVQLYLYVVTALLLFAGHQISRDYVRGELESGYEGPLYLEPLSM
NRFTTALICQLVVCTLCSCVMQTKRIWLFSAHLLPLVARLCLVPLETIVFVNRFAMIFTG
LEVIYFLASNLLVPFNLAKTAYRELAQVVEVYGLLALGMSLWNQLVLPVLFMCFWLVLFA
LQMYTYFSTRDQPTSRERLLFLFLTSIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQ
GYRAFMNDNTMHRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFIVVASILQSMLEI
ADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAYMSYMICQFFHMDFWLLIIISSSILT
SLQVLGTLLIYVLFIMEELRKMPMENMDDVIYYVNGTYRMLEFVVALCVVAYGVCETVFG
EWTVMGSTIVLVHSYYNVWLRAQLGWQSFLLRRDAVNKIKSLPTASEQQLQQHNDICSIC
YQDMTSAVITPCNHFFHAGCLKKWLYVQEACPLCHSQLKSSAQREAGMELQPDAIIHEGP
AEAPMPASTSAEVKSVEQQEVEANNLDETDHPLSSSTG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaaggagcgcgtagagtctgtgctgaatgtgggcctgcgggttcccagcatc
atgctgctggaggtgctttatcgctgggatgtgagctccttcttccagaagatccagagg
agcagtatgagtaacaaccccctcttccagtacaagtacctagccctctacctgcattat
gtaggctatattctgagtttggttctgctgaccctgcctcgtcagcgtttggttcagcta
tacctgtatgttgtcactgctcttctgcttttcgctggacaccagatttcaagggattat
gtacgtggggagctggagtctgggtatgagggcccactctacttagagcctctgtctatg
aaccgcttcactacggctctgatctgccaactggtggtgtgtactctgtgctcctgcgtc
atgcagaccaaacggatctggctcttttcagcacacttactccccctggtggccagattg
tgtctcgtgcctttggagaccattgtgtttgtaaatcgtttcgcaatgatttttaccgga
ctggaggtcatctacttcctagcctctaacctgctagtgccgttcaaccttgccaagacg
gcatacagggagttggcacaggtggtggaggtgtatgggctcctggcccttggcatgtct
ttgtggaatcagcttgttctgcccgtactgttcatgtgcttctggctagttctgtttgct
ttacaaatgtacacgtattttagcacccgagaccagcctacttcaagggaaaggctgctt
ttcctttttcttaccagtattgcagaatgctgtagtactccctactctctgcttggactg
gtgttcactgtgtcgtttgtagctctgggtgtgctcactctctgcaagttctacctgcag
ggctacagggcctttatgaacgataacacaatgcacaggggcatgactgagggaatcaca
cttttgattctggcagtccagacaggtctaattgagctccaggttatccacagagccttc
cttctcagcatcattctcttcattgtggtggcttctattttgcagtcgatgctggagatt
gctgaccccatagtgctggcactgggggcatctagagataagagcttgtggaagcacttt
cgtgcagtcagcctgtgcctgtttctacttgtatttccagcctacatgtcctacatgatc
tgtcagtttttccacatggatttctggcttctcatcataatctcctccagcattcttaca
tctttgcaggtgttgggcacattgctgatctatgtgctgttcattatggaggagttgcgc
aagatgccaatggagaacatggacgatgtaatatactacgtaaacggcacctaccggatg
ctggaatttgttgtggctctgtgtgtcgtggcatacggtgtttgtgagacagtgtttggt
gaatggactgtgatgggctccaccattgtacttgtgcactcctactacaacgtgtggtta
cgggcacagctaggttggcagagctttttacttcgtcgtgatgctgtcaacaagatcaag
agcctacctacagcctctgaacagcagctgcagcaacacaatgacatctgctccatctgc
tatcaggacatgacgtcagctgtcatcacaccatgtaatcacttcttccatgccggctgt
ttaaagaaatggctgtatgtgcaggaggcctgccctctctgccatagccagctaaagagt
tcagcacagcgggaggcaggtatggagttacaacctgatgccatcatccatgagggtcca
gcagaggcacccatgcctgcctcaacctcggctgaagtgaaaagtgttgagcaacaggaa
gtagaggccaacaatctggatgagactgaccatcctctgtcctcttccacaggctaa
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