Silurus meridionalis (southern catfish): 124386013
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Entry
124386013 CDS
T08004
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124386013 (fmr1)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124386013 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
124386013 (fmr1)
mRNA cycle factors
Stress granule specific factors
124386013 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXMR_C2
KH_9
Tudor_FRX1
Agenet
KH_1
FXR_C3
Motif
Other DBs
NCBI-GeneID:
124386013
NCBI-ProteinID:
XP_046705551
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Position
5:complement(5717049..5753561)
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AA seq
570 aa
AA seq
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MEEQAVEVRGASGAFYKALVKDVHENTVTVAFENNWQPERQIPFHDVRFPPPPGAQKEIT
ESDEVEVYSRANDKEPCGWWQAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPINPNKA
TTKNHFLKIRLDVPEDLRQICAKDSAHKDFKKAVGAFNVTYDSDKKQLVILSVNEVTAKR
ATMLTDMHFRSLRTKMSLMLRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDQEAVRKARSYLEFSEDVIRVPRNLVGKVIGKS
GKLIQEVVDKSGVVRVRVEPENEKKSSPLEEGMVPFVFVGTKESISNARLLLDYHLNYLK
EVDQLRMERLQIDEQLRQIGGGPRAPSGRPEKEKTFSSDNGMGHPRGGKPYGRGGRGRRG
PTFASGTNSEASNASETESDHRDELSDWSLAPTDEESVGYPKRAPEGRKRGGASGRGRGG
RGRGGGYKGEDVHWSESRPRNSRDSKPRLQEDSLQIRVDSNNERSVHASRGPQGPSGDPS
GPRQRNIKERGIKKEKQEGQDSQVVMNGVS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaggcggtggaagtgcggggcgcgagcggggctttctacaaggctttggtg
aaggatgtgcacgagaacacggtcactgtggcgttcgaaaacaattggcagccggagcga
cagatcccttttcatgacgtgcggttccctcctcctcctggggctcagaaagagatcact
gagagcgacgaggtcgaggtgtactccagggcaaacgacaaggagccatgtgggtggtgg
caagccaaagtgcgcatggtgaaaggcgagttttacgtgatcgaatacgcagcttgcgac
gccacgctcaacgagatcgtcacgttagagaggctgcggcccataaaccccaacaaagcc
accacaaagaaccacttcctgaaaatcagactggacgttcccgaagacttgcgacagatc
tgcgcaaaagactcggctcacaaggatttcaaaaaagccgtgggagcattcaacgtcacg
tatgactccgataagaagcagctagtcattctgtccgtcaacgaggtgaccgctaaacgg
gcgacgatgctgacagacatgcacttcaggagcctgcgcaccaaaatgtccctcatgcta
aggaacgaagaggccagcaggcagctggagagctcccgtcagttagcgtcgaggttccac
gagcagttcgtggtgcgcgacgatctgatgggtttggccatcggcacccacggggccaac
atccaacaggctcgcaaagttcccggggtcaccaacattgatcttgacgaagagacgtgc
accttccacatctatggagaggaccaggaggctgtgcgcaaagccaggagctacctggag
ttttcagaagatgttatcagggtacccaggaatttagtaggaaaagtcatcgggaagagc
gggaagctgattcaggaagtcgtggacaagtccggagtcgtccgtgtgagagtggaaccg
gaaaacgagaagaaatcctctccattggaggagggcatggtgccgtttgtttttgtcggg
actaaagaaagcatctcgaacgcacgcctactgcttgactaccatctcaactatctgaag
gaagttgatcagttgcggatggagaggcttcagatcgacgagcagctacggcagattggc
ggaggccccagagctccatcaggccgaccggagaaggaaaaaacgttcagctctgacaac
ggcatgggacatccccgagggggcaagccgtacggtcgcggggggcgaggacgacgagga
cctacgtttgcctctggcaccaattctgaagcgtcgaacgcatccgagactgaatccgac
cacagagacgagctgagcgactggtctctggcccccaccgatgaagaatctgtgggttac
cccaaacgcgccccagaaggccggaagagggggggcgctagcggtcgaggacgaggagga
cgaggaagaggaggcggttacaaaggtgaggacgtacactggagcgagtcacgtccccgg
aactccagagattccaagccgaggctgcaggaggattcactacagattcgcgtcgacagc
aataacgagaggagcgtccacgccagccgaggccctcaggggcccagtggcgaccccagc
ggcccccgacagagaaacatcaaggagcgagggataaagaaagagaagcaagaagggcaa
gacagccaggtcgtcatgaacggcgtgtcgtaa
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