Silurus meridionalis (southern catfish): 124386026
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Entry
124386026 CDS
T08004
Symbol
met
Name
(RefSeq) hepatocyte growth factor receptor isoform X1
KO
K05099
proto-oncogene tyrosine-protein kinase Met [EC:
2.7.10.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
smeo04510
Focal adhesion
smeo04520
Adherens junction
smeo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124386026 (met)
04020 Calcium signaling pathway
124386026 (met)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124386026 (met)
04520 Adherens junction
124386026 (met)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124386026 (met)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124386026 (met)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124386026 (met)
Protein kinases [BR:
smeo01001
]
Receptor tyrosine kinases (RTK)
MET family
124386026 (met)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
TIG
Sema
PSI
Kinase-like
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
124386026
NCBI-ProteinID:
XP_046705567
LinkDB
All DBs
Position
5:27058629..27121706
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AA seq
1367 aa
AA seq
DB search
MRITPPNGVYILLILQTLWLGIFGQCKEPSESSKLNLSVTYDLRRFVSNTTVQKLLVFNG
SVYVAANNVLYALSANLEKVHDYETGPAKNSSQCNSCQSLNATNTSMALIMETYYDPELF
VCGPMENGICRRHVLEDGRLDVGIQSIGSHENDDSGYIAGPAGTQIVSVEVGRVVRFFVA
NSEPLDPSLSPSPLHHTISVRKMWDTQDRFEYVSEQSYMDLKPALRGNYPLHYVYSFHSG
LYVYFLTVQRESSTSRAFHTRIVRICSSDLELQHYVEMPFECIYSEKGRRKRSTQTVFNV
LQAAHVAQTGSNLRREMGFKEGEDVLFAAFAKSKPNSPEPTVSSTVCVISIAEINNFFKD
FMRQAYTKPLYHLTGAKMKSYNQSSVGDSFGCGKHDKGYRLEVKGTNPRKDWFNGRFRNV
LLTSIAVVPVQEHTVATLGTADGRVIQVVVSRFGNTEPHVNFLLDTLPVSSEVAVMSPQS
PEASLLLVTGNKVYKVPVIGPGCEQLLNCSSCLLAPAFMGCGWCRKRNLCTRSPRCTASS
WSQDSCPILISEIFPQTAPLKGHTNLTICGRNFGFSKKDRIDAKLIDVDVAGAKCRLMEK
NISSHRLICSLDHVEGSSSDRTVRVRSGKEEGWLEGFSFVNPVITGIVPEFGPKSGGTRL
TIKGSFLNSGSSRKITIGRGTCVFRSSSASMLTCQTPPQDVLSQHSVQVHIDGVTFQAPS
NYTYNEDPLIHNIQPTRSFISGGSTVIASGVYLHSAMQPQMVLSGPPFKEVYVTCTQGED
RLTIVCITPSLKGLNVRPPVATKMKFILDGFSTRQYDMTYVEDPRFEEFQKPTLTPRGSK
SVLEIKVPRVDMEAVKGEVLRVSNRSCESVTLVGNTLECTVPSELQAASRELEVEWMQAS
SSVILGRVMLAQEQDYRPLIAGVVCVSILLLLLLALFAWIKRKKHIDDLAEGMVWYDGRA
HIPHLDMLANARSVSPTNELVSHESLDYRTTLLEDQSLPMSPSESCRPPPYVHAHVDLSS
MLGAEGDPSSPLLPGYAPVDLSSLHPELLKEVQHVVIAREDLLLHVHEIIGRGHFGCVFH
GTLLEPDGQKQHCAVKSLNRITDVEEVSQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPL
VVLPYMKHGDLRNFIRDEGHNPTVKDLMGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE
SYTVKVADFGLARDVYDKEYYSVHNKSGVKLPVKWMALESLQTHKFTTKSDVWSFGVLLW
ELMTRGAPPYSDVNSFDITVFLLQGRRLLQPEFCPDALYNVMVECWHPKPERRPTFSELV
SRISAIFSSFSGEHYILLNTTYVNIDKMTPYPSLISSQSQLNRDCCT
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgagaataactcctcccaatggggtatacattcttctcattcttcagacgttgtggttg
ggaatatttggccagtgcaaagaaccgagtgaaagctccaaactcaatctatccgtgacg
tacgacctccgtcgctttgtctccaacacaactgtgcaaaagcttctggttttcaacgga
agcgtatacgtcgccgctaacaacgtcctctacgccctgtccgccaacctcgagaaagtt
catgactacgaaactggacctgcgaaaaacagctcccaatgcaacagttgccaatctctc
aatgctaccaacaccagcatggccctgataatggagacctactatgaccccgagctgttc
gtctgcggtccgatggaaaacggcatctgtcgccggcacgtgctggaggacggtcggcta
gacgtcggcatacagagcatcggttctcatgaaaatgacgacagcggctacatcgccggt
ccagccggaacccagatcgtgagtgtagaagtcgggagagtcgtgaggttctttgttgct
aattcggaaccactcgatccgtctttatctccatctccacttcaccacaccatctctgta
cgaaagatgtgggacacccaggatcgcttcgagtacgtttccgagcagtcgtacatggac
ctaaagccagcgctgcgtgggaattatcctttgcactacgtctattcctttcacagtggc
ttgtacgtgtacttcctcaccgtccagcgagaaagcagcacctccagagcgttccacacg
cgaattgttcggatctgctcctccgacctggagcttcaacactatgtggaaatgcccttt
gagtgcatttactcagagaaagggagacgcaaacgttcaacacaaacggtgttcaacgtt
cttcaggcagctcacgtagcccaaactggaagcaatctgcgcagggagatgggcttcaaa
gaaggagaagatgtgctctttgcagcattcgccaagagcaagccgaactcccccgagccc
acggtgagctccacggtctgcgtaatctccatcgccgaaatcaacaacttcttcaaggac
ttcatgaggcaggcctacaccaagccactctaccacttaaccggagccaaaatgaagtcc
tacaaccagagctcagtcggcgattccttcggctgcgggaagcatgacaaaggctacagg
ttggaggttaaaggaaccaatccgcgcaaagactggtttaacggacgcttcagaaacgtt
ctcctcacctccatcgccgtggtgcctgtgcaggaacacaccgtggctacgctcgggacc
gcggacgggagagtcatccaggtggtggtttcccgttttggcaacacagagccgcatgtg
aacttcctcttggacacgctccccgtctcttcagaagtcgccgtgatgtctccacagagc
ccagaagcctccttactgctggttacaggaaataaggtttataaggtgcctgtaatcggg
cctggttgtgaacagttattaaactgcagctcgtgtcttctcgctcctgccttcatgggt
tgtggatggtgccggaagagaaacctctgcactcgttcgcctcggtgcaccgcctcaagc
tggagccaagattcctgccccattctcatctcagagatctttcctcaaacggctccactg
aaaggacacaccaacctcaccatctgcggcagaaactttggcttcagtaagaaggaccga
atcgacgccaagctgatcgacgtggacgtggccggagcaaagtgcaggctgatggaaaag
aacatcagcagccatcggttgatctgcagcctggatcatgtggaagggtccagttcggat
cgcactgtcagagtacgcagcggaaaggaggaaggatggctcgagggcttttcgttcgtg
aaccctgttatcaccggaatcgttcctgaatttgggcccaaatctggaggaaccaggctg
accattaagggttcgttcctgaacagcggaagctcgcggaagatcacgatcggccgtggc
acctgtgtgtttcggagttcatcagccagcatgctgacgtgccagactccacctcaggac
gttctctcccaacacagtgtgcaggtgcatatcgatggagtgacgttccaagctccgtcc
aactacacctacaatgaggatccgctgatccataacatccagcccacacgttctttcatc
agtggaggcagcacggtgatagcgtctggcgtctaccttcactcagccatgcagcctcag
atggtcctcagcggtcctccgttcaaagaggtttatgtgacctgcacacagggcgaagac
agactgaccatagtgtgcatcaccccctcgctgaagggcctcaacgttcgtcctccggtc
gccaccaagatgaagttcatactcgacggcttctcaacgcggcagtacgacatgacctac
gtggaggacccgaggttcgaggagtttcagaagcccactttgacgcccagaggcagcaag
agtgtgctggagattaaagttcctcgtgtggacatggaagcggtgaagggcgaggtgttg
cgagtgtccaatcgctcctgtgagagtgtgactctggtgggaaacacactggagtgcacg
gtgccctcggagctccaggctgccagcagagagctggaggtggagtggatgcaggcttca
tcctcggtcattctgggccgcgtgatgttggcgcaggagcaggactacaggccgctaatc
gccggcgtggtgtgcgtgtccatcctgctgctcttactgctcgcgctcttcgcctggatc
aagaggaagaagcacatcgatgatttagctgaagggatggtttggtatgacggccgtgct
cacattccgcacttggacatgctggcaaacgcgaggagtgtcagtcccactaacgaattg
gtgtctcacgagtctctggactatagaaccactttgcttgaggaccagagcttgccgatg
tctccgagcgagtcgtgtcgtcctcctccgtacgtccacgcgcacgtggacctgtcctcc
atgctgggggcggaaggagacccgtcttctcccctcctgcccggttacgcccccgtggac
ctgagcagcctccacccagagctgctgaaagaggtgcagcacgtcgtcatcgccagggag
gacctgctcttacacgttcacgagatcatcggaagagggcacttcggctgtgttttccac
gggaccctgctcgagccggacggccagaaacagcactgcgcagtcaagtctctgaaccga
atcaccgatgtcgaagaggtgtcacagttcctaaaggaaggaatcatcatgaaggacttc
agccaccccaatgtgctgtctctgctgggaatctgcctgcccagtgaaggctctccactg
gtggtgctgccttacatgaagcacggagatctgcgcaacttcatccgagatgagggccac
aaccctaccgtaaaggatctcatgggcttcggcttgcaggtggcgaaaggcatggagtat
ctcgccagcaagaagtttgttcaccgagaccttgcagcaagaaactgcatgctggatgag
agttacacagtgaaggtggcagactttggcctggcccgagacgtgtacgataaggagtac
tacagcgtgcacaacaagagcggagtcaagctgccggtgaaatggatggctctagaaagc
ctgcagactcacaaattcaccaccaagtctgatgtttggtcgtttggtgtgttgctatgg
gaactgatgacccgaggagccccgccctactccgacgtcaactccttcgacatcacggtt
ttcctcctgcaaggacgacgactgctgcagcccgagttctgccctgatgccctctacaac
gtgatggttgagtgttggcaccccaaacccgagcggcgtcccaccttctccgagctcgtc
tcgcgcatctcagccatcttctccagcttcagcggagagcactacatcctcctgaacacc
acctacgtgaacatcgacaagatgactccatacccttctctcatctcgtctcagagccag
ctgaaccgggactgctgcacctga
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