Silurus meridionalis (southern catfish): 124386026
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Entry
124386026 CDS
T08004
Symbol
met
Name
(RefSeq) hepatocyte growth factor receptor isoform X1
KO
K05099
proto-oncogene tyrosine-protein kinase Met [EC:
2.7.10.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
smeo04510
Focal adhesion
smeo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124386026 (met)
04020 Calcium signaling pathway
124386026 (met)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124386026 (met)
04520 Adherens junction
124386026 (met)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124386026 (met)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124386026 (met)
Protein kinases [BR:
smeo01001
]
Receptor tyrosine kinases (RTK)
MET family
124386026 (met)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
TIG
Sema
PSI
Kinase-like
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
124386026
NCBI-ProteinID:
XP_046705567
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Position
5:27058629..27121706
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AA seq
1367 aa
AA seq
DB search
MRITPPNGVYILLILQTLWLGIFGQCKEPSESSKLNLSVTYDLRRFVSNTTVQKLLVFNG
SVYVAANNVLYALSANLEKVHDYETGPAKNSSQCNSCQSLNATNTSMALIMETYYDPELF
VCGPMENGICRRHVLEDGRLDVGIQSIGSHENDDSGYIAGPAGTQIVSVEVGRVVRFFVA
NSEPLDPSLSPSPLHHTISVRKMWDTQDRFEYVSEQSYMDLKPALRGNYPLHYVYSFHSG
LYVYFLTVQRESSTSRAFHTRIVRICSSDLELQHYVEMPFECIYSEKGRRKRSTQTVFNV
LQAAHVAQTGSNLRREMGFKEGEDVLFAAFAKSKPNSPEPTVSSTVCVISIAEINNFFKD
FMRQAYTKPLYHLTGAKMKSYNQSSVGDSFGCGKHDKGYRLEVKGTNPRKDWFNGRFRNV
LLTSIAVVPVQEHTVATLGTADGRVIQVVVSRFGNTEPHVNFLLDTLPVSSEVAVMSPQS
PEASLLLVTGNKVYKVPVIGPGCEQLLNCSSCLLAPAFMGCGWCRKRNLCTRSPRCTASS
WSQDSCPILISEIFPQTAPLKGHTNLTICGRNFGFSKKDRIDAKLIDVDVAGAKCRLMEK
NISSHRLICSLDHVEGSSSDRTVRVRSGKEEGWLEGFSFVNPVITGIVPEFGPKSGGTRL
TIKGSFLNSGSSRKITIGRGTCVFRSSSASMLTCQTPPQDVLSQHSVQVHIDGVTFQAPS
NYTYNEDPLIHNIQPTRSFISGGSTVIASGVYLHSAMQPQMVLSGPPFKEVYVTCTQGED
RLTIVCITPSLKGLNVRPPVATKMKFILDGFSTRQYDMTYVEDPRFEEFQKPTLTPRGSK
SVLEIKVPRVDMEAVKGEVLRVSNRSCESVTLVGNTLECTVPSELQAASRELEVEWMQAS
SSVILGRVMLAQEQDYRPLIAGVVCVSILLLLLLALFAWIKRKKHIDDLAEGMVWYDGRA
HIPHLDMLANARSVSPTNELVSHESLDYRTTLLEDQSLPMSPSESCRPPPYVHAHVDLSS
MLGAEGDPSSPLLPGYAPVDLSSLHPELLKEVQHVVIAREDLLLHVHEIIGRGHFGCVFH
GTLLEPDGQKQHCAVKSLNRITDVEEVSQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPL
VVLPYMKHGDLRNFIRDEGHNPTVKDLMGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE
SYTVKVADFGLARDVYDKEYYSVHNKSGVKLPVKWMALESLQTHKFTTKSDVWSFGVLLW
ELMTRGAPPYSDVNSFDITVFLLQGRRLLQPEFCPDALYNVMVECWHPKPERRPTFSELV
SRISAIFSSFSGEHYILLNTTYVNIDKMTPYPSLISSQSQLNRDCCT
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgagaataactcctcccaatggggtatacattcttctcattcttcagacgttgtggttg
ggaatatttggccagtgcaaagaaccgagtgaaagctccaaactcaatctatccgtgacg
tacgacctccgtcgctttgtctccaacacaactgtgcaaaagcttctggttttcaacgga
agcgtatacgtcgccgctaacaacgtcctctacgccctgtccgccaacctcgagaaagtt
catgactacgaaactggacctgcgaaaaacagctcccaatgcaacagttgccaatctctc
aatgctaccaacaccagcatggccctgataatggagacctactatgaccccgagctgttc
gtctgcggtccgatggaaaacggcatctgtcgccggcacgtgctggaggacggtcggcta
gacgtcggcatacagagcatcggttctcatgaaaatgacgacagcggctacatcgccggt
ccagccggaacccagatcgtgagtgtagaagtcgggagagtcgtgaggttctttgttgct
aattcggaaccactcgatccgtctttatctccatctccacttcaccacaccatctctgta
cgaaagatgtgggacacccaggatcgcttcgagtacgtttccgagcagtcgtacatggac
ctaaagccagcgctgcgtgggaattatcctttgcactacgtctattcctttcacagtggc
ttgtacgtgtacttcctcaccgtccagcgagaaagcagcacctccagagcgttccacacg
cgaattgttcggatctgctcctccgacctggagcttcaacactatgtggaaatgcccttt
gagtgcatttactcagagaaagggagacgcaaacgttcaacacaaacggtgttcaacgtt
cttcaggcagctcacgtagcccaaactggaagcaatctgcgcagggagatgggcttcaaa
gaaggagaagatgtgctctttgcagcattcgccaagagcaagccgaactcccccgagccc
acggtgagctccacggtctgcgtaatctccatcgccgaaatcaacaacttcttcaaggac
ttcatgaggcaggcctacaccaagccactctaccacttaaccggagccaaaatgaagtcc
tacaaccagagctcagtcggcgattccttcggctgcgggaagcatgacaaaggctacagg
ttggaggttaaaggaaccaatccgcgcaaagactggtttaacggacgcttcagaaacgtt
ctcctcacctccatcgccgtggtgcctgtgcaggaacacaccgtggctacgctcgggacc
gcggacgggagagtcatccaggtggtggtttcccgttttggcaacacagagccgcatgtg
aacttcctcttggacacgctccccgtctcttcagaagtcgccgtgatgtctccacagagc
ccagaagcctccttactgctggttacaggaaataaggtttataaggtgcctgtaatcggg
cctggttgtgaacagttattaaactgcagctcgtgtcttctcgctcctgccttcatgggt
tgtggatggtgccggaagagaaacctctgcactcgttcgcctcggtgcaccgcctcaagc
tggagccaagattcctgccccattctcatctcagagatctttcctcaaacggctccactg
aaaggacacaccaacctcaccatctgcggcagaaactttggcttcagtaagaaggaccga
atcgacgccaagctgatcgacgtggacgtggccggagcaaagtgcaggctgatggaaaag
aacatcagcagccatcggttgatctgcagcctggatcatgtggaagggtccagttcggat
cgcactgtcagagtacgcagcggaaaggaggaaggatggctcgagggcttttcgttcgtg
aaccctgttatcaccggaatcgttcctgaatttgggcccaaatctggaggaaccaggctg
accattaagggttcgttcctgaacagcggaagctcgcggaagatcacgatcggccgtggc
acctgtgtgtttcggagttcatcagccagcatgctgacgtgccagactccacctcaggac
gttctctcccaacacagtgtgcaggtgcatatcgatggagtgacgttccaagctccgtcc
aactacacctacaatgaggatccgctgatccataacatccagcccacacgttctttcatc
agtggaggcagcacggtgatagcgtctggcgtctaccttcactcagccatgcagcctcag
atggtcctcagcggtcctccgttcaaagaggtttatgtgacctgcacacagggcgaagac
agactgaccatagtgtgcatcaccccctcgctgaagggcctcaacgttcgtcctccggtc
gccaccaagatgaagttcatactcgacggcttctcaacgcggcagtacgacatgacctac
gtggaggacccgaggttcgaggagtttcagaagcccactttgacgcccagaggcagcaag
agtgtgctggagattaaagttcctcgtgtggacatggaagcggtgaagggcgaggtgttg
cgagtgtccaatcgctcctgtgagagtgtgactctggtgggaaacacactggagtgcacg
gtgccctcggagctccaggctgccagcagagagctggaggtggagtggatgcaggcttca
tcctcggtcattctgggccgcgtgatgttggcgcaggagcaggactacaggccgctaatc
gccggcgtggtgtgcgtgtccatcctgctgctcttactgctcgcgctcttcgcctggatc
aagaggaagaagcacatcgatgatttagctgaagggatggtttggtatgacggccgtgct
cacattccgcacttggacatgctggcaaacgcgaggagtgtcagtcccactaacgaattg
gtgtctcacgagtctctggactatagaaccactttgcttgaggaccagagcttgccgatg
tctccgagcgagtcgtgtcgtcctcctccgtacgtccacgcgcacgtggacctgtcctcc
atgctgggggcggaaggagacccgtcttctcccctcctgcccggttacgcccccgtggac
ctgagcagcctccacccagagctgctgaaagaggtgcagcacgtcgtcatcgccagggag
gacctgctcttacacgttcacgagatcatcggaagagggcacttcggctgtgttttccac
gggaccctgctcgagccggacggccagaaacagcactgcgcagtcaagtctctgaaccga
atcaccgatgtcgaagaggtgtcacagttcctaaaggaaggaatcatcatgaaggacttc
agccaccccaatgtgctgtctctgctgggaatctgcctgcccagtgaaggctctccactg
gtggtgctgccttacatgaagcacggagatctgcgcaacttcatccgagatgagggccac
aaccctaccgtaaaggatctcatgggcttcggcttgcaggtggcgaaaggcatggagtat
ctcgccagcaagaagtttgttcaccgagaccttgcagcaagaaactgcatgctggatgag
agttacacagtgaaggtggcagactttggcctggcccgagacgtgtacgataaggagtac
tacagcgtgcacaacaagagcggagtcaagctgccggtgaaatggatggctctagaaagc
ctgcagactcacaaattcaccaccaagtctgatgtttggtcgtttggtgtgttgctatgg
gaactgatgacccgaggagccccgccctactccgacgtcaactccttcgacatcacggtt
ttcctcctgcaaggacgacgactgctgcagcccgagttctgccctgatgccctctacaac
gtgatggttgagtgttggcaccccaaacccgagcggcgtcccaccttctccgagctcgtc
tcgcgcatctcagccatcttctccagcttcagcggagagcactacatcctcctgaacacc
acctacgtgaacatcgacaagatgactccatacccttctctcatctcgtctcagagccag
ctgaaccgggactgctgcacctga
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