Silurus meridionalis (southern catfish): 124386044
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Entry
124386044 CDS
T08004
Symbol
ppid
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase D
KO
K05864
peptidyl-prolyl isomerase D [EC:
5.2.1.8
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04217
Necroptosis
smeo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124386044 (ppid)
04218 Cellular senescence
124386044 (ppid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smeo03110
]
124386044 (ppid)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
124386044 (ppid)
Chaperones and folding catalysts [BR:
smeo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
124386044 (ppid)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
TPR_1
TPR_2
TPR_11
TPR_19
TPR_12
TPR_14
ANAPC3
TPR_16
TPR_8
TPR_9
DUF3856
TPR_17
MIT
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
124386044
NCBI-ProteinID:
XP_046705594
LinkDB
All DBs
Position
5:complement(3943595..3951755)
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AA seq
371 aa
AA seq
DB search
MSNPSPVSKPGNANNPRVFFDVEIGGGKVGRIVFELFADVVPKTAENFRALCTGEKGLGK
STGKPLHFKGCPFHRIIKKFMVQAGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSM
ANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVLKGMGVVKMLEAIDTEEEHPVKPCIIAD
CGEHKAGDDWGVAPNDGSGDVHSDFPEDSDVDFNNADKVLSVAEDIKTIGNNFFKAQNWE
AAMKKYSKALRYLELCGSNVEDDSEQKKLEPTALSCILNTAACKLKLQQWQEAIESCNEA
LELNQTHAKALFRRAQAWQGLKEFNKAMIDLKKAQETAPDDKAIANEMLRVKQKVKEETE
REKKIYSKMFA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccgagtccagtgtccaaacccggcaatgcaaacaacccgagggttttcttc
gatgtagaaatcggaggtggaaaagttggccgcatcgtgttcgagctcttcgctgacgtc
gtcccgaaaacggcagagaatttccgcgctctgtgcaccggcgagaaagggctcggaaaa
agcaccgggaaacccctgcacttcaagggatgtccttttcaccgcatcatcaagaagttc
atggtgcaggcaggagatttctccaatcagaacggcaccggaggagagagtatctacggg
gaaaaatttgaggatgaaaacttccactataagcatgacaaagagggcttgctgagtatg
gcgaacgcggggccaaacaccaacggctcgcagttctttatcaccactgtgcctacacct
cacctagacggcaagcacgtggtgttcgggcaggtgctgaagggcatgggcgtggtcaag
atgctggaggccatcgacaccgaggaagagcatccggtcaagccatgtatcattgctgat
tgtggagagcataaagcaggcgatgattggggcgtggctcctaatgatggctccggagac
gtgcactcggacttcccagaggactcggatgtggactttaacaacgctgataaagtcttg
tccgtggcggaggacatcaaaaccatcggaaacaacttttttaaagcccagaactgggag
gctgctatgaagaagtactccaaagccctgaggtatttagagttatgtggcagtaacgtg
gaagatgacagcgagcagaaaaagctggaacccacggccctgagctgcatcctcaacacg
gcagcctgcaaactgaaactgcagcagtggcaggaagccatcgagagctgcaatgaagct
ctggagctgaatcagacccatgctaaagctttgttcaggagagcgcaggcttggcaaggc
ctcaaggagttcaacaaggcaatgatcgatctgaagaaagcacaagagactgcaccagac
gacaaagctattgcaaacgagatgctgagggtcaagcagaaggtgaaggaggagactgag
agagaaaagaagatctactccaaaatgtttgcgtaa
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