Silurus meridionalis (southern catfish): 124386111
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Entry
124386111 CDS
T08004
Symbol
psmd13
Name
(RefSeq) LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 13
KO
K03039
26S proteasome regulatory subunit N9
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124386111 (psmd13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smeo03051
]
124386111 (psmd13)
Proteasome [BR:
smeo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
124386111 (psmd13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSD13_N
PCI
Rpn9_C
COX5A
Motif
Other DBs
NCBI-GeneID:
124386111
NCBI-ProteinID:
XP_046705719
LinkDB
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Position
5:complement(28429472..28444394)
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AA seq
377 aa
AA seq
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MKDVLGFLKQQQSKSPTPEVAAEWHNLEDLYNRKLWHQLTLKLSEIVQDVSVCKGDALSR
XNLYENFINDFEHRCNXPLSLVEILLHVVRQISDPNTAIVFLEKTKEKVSSDEAVILCKT
VIGSLKLDINDLPATKKLIEEVEEMLNALPGVTSVHGRFYDLSSKYYRIIGNHALYYKDA
LHYLGCVDVKDLPAAERAFTLGLAGLLGEGVYNFGELLMHPVLESLKNTDKQWLIETLFA
FNSGNVEKFQALKSAWGQQPDLAAQEAKLMKKIQLLCVMEMTFTRPANHRQLTFQEISQS
TKVPVNEVELLVMKALSVGLLRGNIDEVDQKVQMTWVQPRVLDLPQIKGMKERLDFWCGD
VKSMAVLVEHQAQDILT
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgttctcggattcctcaagcaacaacaaagtaaaagtccgactccagaggtc
gcggcggaatggcacaatctggaggatctatacaacagaaagttgtggcatcagttgact
ctaaagttgagtgagattgtacaggacgtgtctgtgtgtaaaggcgacgccttatccagg
taaaatctctacgagaacttcatcaatgactttgaacacaggtgtaattaacctctatca
ttggtggaaatcctcctccatgtggtcagacagatatcagatcccaacactgccattgtg
ttcttggagaagacaaaggagaaagtgagcagtgatgaggcagtgattctgtgtaagact
gtgatcgggagtctgaagctcgacatcaacgacttgcctgctactaaaaaactgattgag
gaggtagaggagatgctgaatgcgttgccgggggtgacgtctgtacacgggcgcttttac
gacttgtccagtaaatattaccgcatcattgggaaccacgctctgtattataaagacgct
ctgcactacctgggctgtgtggatgttaaagacctgccagcagcagagagagcctttact
ctgggattggctggcctgcttggagagggtgtgtacaattttggagagctgctgatgcac
cctgtactggagtctctgaagaacacggataaacagtggctgatcgagacgctatttgcc
ttcaactccgggaacgtggagaagtttcaagctttaaaatcagcttggggtcaacagcct
gatcttgctgctcaggaggccaaactgatgaagaagatccagctgttgtgtgtgatggag
atgaccttcaccagaccagcgaatcacagacaactgaccttccaggagatctctcagagc
accaaggttccagtaaatgaggtggagctgttggtgatgaaagctctgtcagtgggtctt
ctgcgaggaaacattgacgaagtggatcagaaagttcagatgacctgggtacaaccgcga
gttctcgatcttccacagatcaagggcatgaaggagcgtctggatttctggtgtggagat
gtaaagagcatggctgtgctggtggagcatcaggctcaggacattcttacataa
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