Silurus meridionalis (southern catfish): 124386182
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Entry
124386182 CDS
T08004
Name
(RefSeq) uncharacterized protein LOC124386182 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124386182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124386182
Membrane trafficking [BR:
smeo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124386182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
124386182
NCBI-ProteinID:
XP_046705808
LinkDB
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Position
5:complement(21351260..21365703)
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AA seq
1350 aa
AA seq
DB search
MPLISLDDEDQRWVPTHVNVTVLRARALRTKGKQGSRYVYTVIQLGKQKYTTGLAEKAAE
PGWNEECSLELQPGLLECVGAHPPSSGNLILTVMLRVLIGLDVFLGEAVVPLDKVFQGGT
CPRNEWLKLHSKAGRKEKERGELQLTIQFTRNNMTASMYDLTIQDKPRSAFGKLRDRVTG
KKRGDVESSSAILPGRYAALSSSTSQHFQEDGGGEDQVQEECSDEGKSKVKGFFLKGKLR
KNSDTHSCSSLASESSMASSAGDPFVPIELCSTPVYSTRVADPFRTDSDSGVKVFTAPKV
MTHKRAHSDEASKITVASRPSTAVESVKGQNILLSKSTLCINGSHVYSEPVYSKTPGNLP
IKRTLLEKCSPLSRSLQNLTRRSEETQRRSSMDKSKRELEGDGEGCSALTEGFTTSVGKP
VHATAPLVMASSATDVSDKGKKLRKTLFSSGRSDSLPSKTEQGQEGRMRGWFGSSDGQNK
PRLGVPPKVESSPETSTSLSPCYPTVPPHSLSLVCASSHKSSCSVGPHSNPFTHPSPPPP
SISPTNPFLTRLQRNPFFEDLIAEEALKSPPAINSNSTFSHYPAFPLKCGFPSTFHNTTP
NKMSIKRERPRNVARQSSLPTLMSGTPETATVNSDNAVQAGHPLSKSRGEWDEFEALASS
RLKSPVGTPTRPPSAPNPPSPPNSYPVESCSNKPRVDERIFNDCNLPALTSRRPVRTPLP
FQERCSDGWLDRAQELAVQKEACLLFQTDLASVRHRERHRDANTKVSHLDKDMNCVILDQ
DVNVCLSAHTVQMHKDENLNILQNGQEKIWTEGGLKIAPTNSHYKYEHIQENSLHSASDH
TVPSIPFCLSDCDTTVSESLCSDFQVQLNPESSFELKPFGNTITAEVITNPDSNNNNTND
TSEFAFIDCDSSASDVNQTTFGMIAKESNKASTQCQDLLNRKAELESIFRKEIPETDVIT
SEKFTNEHYEKHCENIEQHIIQPHTNFTLRVESEDPNHKESSVSPQTIPQRDRDDGSMTE
KLKPKATEDNAGSDAPHEVKCCLIYDKIKTKTAELKLEANWPNVPVSESHTNTESPLTLT
DCISFEDLHARVAPRGSKSPSNIEVRSARIRTRSNTNSPKTDPSAVLPTVSSEISSAKIS
HSDLIGHTSSSPSFSHPNATSDPSLSPLMHYPPARPGSGSTLAEASNITSSLQLQSTAKH
TLTTEEAESASSRPPAEESSPHPVKPLANTAVPGEKKSVLEKLRSSIHPGRATQQTMAEP
EKTQVFMSEAHTHYQTMSNMELIALLLQQEMDAERQRAESELQATLLEKREAELKKLKVQ
VRDLEDYIDKLLVRIMEQTPTLLQVRARPK
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgatcagcctggatgatgaagatcagagatgggttcctacgcacgtcaacgtg
accgtgcttcgggccagggcgctacggaccaagggcaagcagggcagccgctatgtctac
accgttatccagctggggaagcagaagtacacgacgggactggcggagaaagcggccgag
cccgggtggaacgaggaatgttccttagagctgcagcccggcctgctggagtgtgtggga
gcgcatccgcccagcagtgggaatctgatcctcaccgtcatgctcagggttctcatcgga
ctcgacgtgtttctaggggaagccgtggtgcctttggataaggtgtttcagggaggaacg
tgccctaggaacgagtggctaaagttgcactctaaagctggaagaaaggagaaagagcga
ggagagctgcagcttaccatccagttcactcgcaataacatgacagccagcatgtatgat
ctgaccatccaggacaaacctcgttcagcctttggaaagttgagagaccgtgtcacaggc
aagaaaagaggagacgtggagtcatcctcagccatcctccccggacgctatgccgctttg
tcaagctcaacgagtcagcatttccaggaggatggtggtggagaggaccaagtacaagag
gagtgtagtgatgaaggcaagagcaaggtgaagggcttctttctgaaggggaagttgcga
aagaactcggacacacactcctgttcttcattggcctcagaaagcagcatggcgtcatca
gcaggggatccttttgttcccattgagctatgcagcacacctgtctacagcaccagagtc
gcggatcctttccgcactgactccgacagtggagtaaaggtgttcacagctcctaaggta
atgacccacaagcgtgcacacagcgacgaggctagtaaaatcacagttgcctcacgtccc
agtacggctgtagagagtgtaaagggccaaaatatcctgctctctaagtctactctctgc
atcaatggcagccatgtttactccgaacccgtctactccaaaacaccagggaatctgcca
atcaaacgcacgctactagagaaatgctctcctttatcacgctcgctgcagaatcttaca
cgccgcagtgaagagacacaaagacgtagctctatggacaagagcaaaagggagcttgag
ggagatggtgaaggttgctcagcacttacagagggattcaccacctcagtggggaagcca
gtgcatgcaactgcacccctggtgatggcttcttcggctactgatgtctcagataaaggg
aagaagctgaggaagactttgttctctagtggaagaagcgactcactcccatctaaaact
gagcagggtcaggagggacgtatgcgtggatggttcggttccagtgacgggcaaaacaag
ccaaggctgggagttcctcctaaagtagaaagcagcccagaaacatccacttccctctct
ccttgctaccccactgtaccaccacactctctttccctagtttgtgcttctagccataag
tcgtcctgttctgttggccctcactctaatccattcactcatccttcacctccaccaccc
tctatttcccctaccaacccttttctcacacgactgcaaaggaaccctttttttgaggat
ctcatagctgaagaagctttgaaatctcctcctgcaattaacagtaactcaacattcagc
cattacccagcattccctctgaagtgtggctttccaagcacttttcataataccacacca
aacaaaatgtctataaaaagagagaggcctcgaaatgtagctaggcagagttcccttcca
accttaatgtctgggacacctgagacagccactgtgaactccgataatgcagtgcaagca
gggcatcctttgtccaagagtcgaggggaatgggatgaatttgaggctttggccagtagc
cgtcttaaatcaccagttgggacacctactcgaccaccctcagccccaaatcctccttca
cctcctaactcttatcctgtagaatcttgcagtaataaacccagggttgacgaacgaatc
ttcaatgactgtaacctgcctgccttaacctcacgaaggccagtgaggaccccgcttccc
tttcaagagaggtgctcagatggctggcttgacagggcacaggagcttgcagtccaaaaa
gaagcttgcctgctcttccagacagatttggcctcagtacgacatagagagagacataga
gatgcaaacaccaaagtttctcatttagataaagacatgaactgtgttattctggaccag
gatgtgaatgtttgtctgtctgcacatactgtacaaatgcacaaagatgaaaatctgaac
attttgcaaaatgggcaagagaaaatttggactgagggaggcttaaaaattgctccaacg
aattcacattataagtatgaacacatacaggaaaactccctgcattctgcaagtgatcac
actgtgcccagtattccattttgcctctcagactgtgatacgactgtgagtgaatcactg
tgcagtgactttcaggtccagctaaatcctgaatcttcctttgaactgaagccctttggg
aacacaataactgctgaggtcatcactaatccagattccaataataataacacaaatgac
acttctgagtttgcttttattgattgtgacagctcagcttcagatgtgaaccagactact
tttggcatgatagctaaagagagcaataaggcatcaacccagtgtcaagatttattaaac
aggaaggcagagcttgaatcaatattccgtaaggaaattccagaaactgatgttattaca
agtgaaaagttcaccaatgaacattatgaaaaacactgtgagaacatagaacaacacatc
atccaaccacatacaaatttcaccttaagggttgaatcagaggatcccaatcacaaagag
agctctgttagtccacaaacaatcccacaacgagacagggatgacggaagcatgacagaa
aagcttaaacctaaggcaacagaagacaatgcaggctctgatgcgcctcatgaagttaaa
tgctgtctgatttatgacaagattaagactaaaacagctgaactcaagctagaagcgaat
tggcccaatgttcctgtttcagagagtcacacaaacactgagtcacctttgactcttaca
gactgcatcagttttgaggatttgcatgctcgagtagcaccaagaggctcaaaaagccct
tccaacattgaagttagatcagcgcgcatcagaacacgatcaaatacaaactcccccaag
actgaccccagtgcagttttaccaacagtcagctctgaaattagttcagccaaaatttca
cactcagaccttattgggcatacaagttcatccccttctttctcccatcctaatgccact
tctgatcccagcctgtccccacttatgcattatccacctgcaaggcctggttcgggaagc
actctggctgaagcctccaacattacctcctcactccagctgcagtccactgcaaagcac
acacttaccacagaggaggcagaatcggctagcagtcgccctcccgctgaggagagcagc
ccccatccagtgaagcctctggccaacacagcagtaccaggagagaagaaatcggttttg
gagaagctgcgttcctccatccatcctggacgtgccacacagcagaccatggctgaacca
gaaaaaacacaggtgttcatgtcagaagcccacactcactaccagactatgagtaacatg
gagctgattgcactactgctgcaacaggagatggatgcggagaggcagcgggctgagtca
gagctccaggccacgcttttggagaagcgtgaggctgagctgaagaaactaaaggtccag
gtgcgagacctggaggactacatcgacaagctgctggtgcgcatcatggagcaaacaccc
accttgctgcaggtgcgcgcccggcccaaatga
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