Silurus meridionalis (southern catfish): 124386230
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Entry
124386230 CDS
T08004
Symbol
smpd3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00600
Sphingolipid metabolism
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
124386230 (smpd3)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
124386230 (smpd3)
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Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
124386230
NCBI-ProteinID:
XP_046705891
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Position
5:27246227..27299141
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AA seq
688 aa
AA seq
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MVLHTSPYPSAFLNFLSNLSWALVFPCYWMLDRLLASCVATSLEKRRRSQDPCSFLALGM
LISTPLYLVLLLASLPFALLGFLVWAPLQASRHPYIYTYRKPDANRAEHGTVAGSGSGIN
EWRPQGRSFCFGSANVCLLPDSLARFNNLADTQRRAREVGKRIRNGASRPQIKIYIDSPT
NTSISAVSFCSVATQGFRRTSSLDHRPEPATVSDADSDPVAECPVHSSGGTTSDCPVHNT
QNVPECPLHPNGEEASSDCPIHQSPDTQASSDCPVHSTTVATNSEECPLHPSGVQISITS
PDPEPSEEEERNHQTSEGDMGSMHSRAASRESLTRFHGATDGGIPSNNTLSQHRTSVFKR
PVGRKRRQGDDGFDHEISAFFPANLDFLCLQEVFDRRASERLCCQLHRYFPYVLSDVGRY
GWKGCCSRFKFLNSGLVLASRYPILDAHYECYPNGRSEDALASKGVLYAKVQVGTSHQEQ
RIVGYIACTHLHAIEGDATVRCEQLDLLLQWGAEFKKATSQSPGQEKGMEDQVAFDIVLG
DLNFDNCSSEDKLEQQHAIFTQYRDPCRLGPGEDKPWALGTLLDTSGLYDEEVSSPESLQ
KVMENEECRKEYLVFPTSKNQCPSQKGRKIPLKGNGRRIDYILYREEGLHADWKVDIEEF
SFITQLAGLTDHLSVAARLAVSTGEEES
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcacacatccccttacccaagtgcctttctcaattttctcagcaacctatcc
tgggccctggttttcccgtgttactggatgttggacaggctcctggcttcatgtgtggcc
acatcacttgaaaagcgaaggcgctcgcaggacccctgctcttttctggctctagggatg
ttaatttctacaccgctgtacctagtactgctcctggcatccctaccatttgccctgctg
ggatttctggtctgggcacctctgcaggcatcacgccatccatatatctacacgtaccga
aaaccagatgcaaatcgggcagagcatggtactgttgccgggtctgggtcaggaattaac
gaatggcgcccccaaggtcgtagtttctgctttggcagtgccaacgtgtgccttcttccg
gactcgctggctcgcttcaacaacttggcagacactcagcgcagggcacgagaggtgggc
aagcgcatccgtaatggtgcgagccgaccacaaatcaagatctacatcgattctcctaca
aacacctcaatcagcgctgtgtccttctgcagcgtggctacacaaggcttccggcgaaca
tcctcgctagaccatcgtcctgaaccagcgacagtaagtgacgctgacagcgatcctgtt
gcggagtgtccagtgcattcatctggtggaacaacttcggactgccctgtccataatacg
caaaatgttcctgaatgtcccttgcaccctaatggggaagaagcttcttcagattgtccc
atccaccaatcgccagatacacaggcatccagtgattgtccggtccactccaccacagtg
gccacaaactccgaagaatgtccattgcatccatcaggggtccagatcagcattacatca
cctgaccccgagccttctgaggaggaagaacgaaaccatcaaacaagtgagggagatatg
ggcagcatgcacagtcgtgctgcctcccgtgagtctttgacccgtttccatggggccact
gatggaggaataccatccaacaatactctttcacaacaccgtacctctgtttttaaaagg
ccagtcggccgcaagcgtcgacaaggggatgacggctttgaccatgagatctcagctttt
tttcctgccaatttggatttcctgtgcctgcaggaagtgttcgacagacgggcttcagaa
aggctttgctgtcagctacaccgctactttccatatgtcctgagtgatgtgggacgctat
ggctggaagggttgctgctcaagattcaagttcctaaacagtggacttgtcctggccagc
cgataccccatcctggatgcacattatgagtgttaccctaatggccgttcagaagatgca
ctcgcttccaagggtgttctctatgccaaggtccaggtgggcacctcgcaccaggaacag
aggattgtgggatacatcgcctgcacacacctccatgccatagaaggcgatgcgacggtg
cgttgcgagcagttggatctgctcttgcagtggggtgccgagtttaagaaggccacgtct
caatccccaggtcaggaaaaaggtatggaggaccaggtcgcctttgacatcgtcctcgga
gacctcaacttcgataactgctcctcagaggataagttggagcaacagcacgctattttt
actcagtacagagatccgtgtcggctcgggcctggagaggacaaaccatgggctttgggt
accctactggacacgagtggcttatatgatgaagaagtcagctcaccagagagtctacaa
aaggttatggagaacgaagagtgcaggaaggagtacttggttttcccgaccagtaagaac
cagtgtccgagtcagaagggtcgcaaaatcccgctgaaggggaacggacgcaggatcgac
tacatcctgtacagagaggaaggcctacacgccgactggaaagtggacatcgaggagttc
agtttcatcacacagctggccggactgaccgatcacctctcggtggcagcgcgactcgcc
gtctctacaggagaggaagagtcctaa
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