Silurus meridionalis (southern catfish): 124386232
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Entry
124386232 CDS
T08004
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124386232 (sox21a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124386232 (sox21a)
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
124386232
NCBI-ProteinID:
XP_046705910
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Position
1:complement(8009517..8011194)
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AA seq
226 aa
AA seq
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MSKQTDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKSSVKKDRYQCNVAYNFGEQDALKGVLTHPEKTAAAA
VAAARALLGHSVPASPYPYLDIHSKMSDPFTHASLDYSGRVVAFPRMGLLGATHTHPSPG
NPTYMMPCNYPAWTPSAPHPPPLAYVLLPGMRKTLHEPYSAFTAAL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacaaacggaccatgtcaaacgaccaatgaacgcctttatggtttggtcgcgg
gcccagagacggaagatggcccttgacaacccgaagatgcacaactccgagatcagcaag
cggctcgggggcgagtggaaacttctgtccgactcggagaaaagacctttcatcgacgag
gccaaacgtctccgcgcggttcatatgaaggagcacccggactacaagtacagaccgcgg
cgcaagccaaagtcctcagtgaagaaggacagatatcagtgtaacgtggcgtataacttt
ggggagcaggacgccctaaaaggtgtactaacccaccctgaaaagactgctgctgccgcg
gtagctgccgccagggcgctcctcggtcactcagtccccgccagcccttacccttacctg
gacatacactccaaaatgtcagacccgttcacacacgcgtcgctcgactattccggacgt
gttgttgcgtttcctagaatgggactccttggtgccacgcacacgcacccttctccgggc
aatcctacatacatgatgccctgtaactacccggcgtggacaccttcagctcctcatcct
cctcctttagcctatgtgctcttaccggggatgcgcaaaactctgcacgaaccttattct
gcttttacagcggccttgtag
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