Silurus meridionalis (southern catfish): 124386239
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Entry
124386239 CDS
T08004
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00450
Selenocompound metabolism
smeo00970
Aminoacyl-tRNA biosynthesis
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
124386239 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124386239 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smeo01007
]
124386239 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124386239 (mars1)
Enzymes [BR:
smeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
124386239 (mars1)
Amino acid related enzymes [BR:
smeo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124386239 (mars1)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124386239 (mars1)
Prokaryotic type
Other AARSs
124386239 (mars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
tRNA-synt_1
Anticodon_1
GST_C_3
DUF4404
DZR_2
Motif
Other DBs
NCBI-GeneID:
124386239
NCBI-ProteinID:
XP_046705922
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All DBs
Position
1:complement(15622477..15637845)
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AA seq
846 aa
AA seq
DB search
MKLFVSEGNPQCVKVLAALEHTGVKCDLQLLGHEEKVVSFLSRPVLPAVLLPSGQQLFSA
NAICQYLFEVGGKEITDTSRQLLEWEATELQPVLLQALHVAVLQGKSSEAGTLLKVTLSW
LEQFLSGKSTQFLTAETVEVADIVLWSALYPILSDSDLNAGELHLVRGWFKRVSQLPACT
KAVQAILPGKALSALKNFLQKQPALHTQRRENLPSETEEAEHVMTEEEIEVAGQTFSGGL
AESRVTVERKHPVLPKEGKRNVLVTSALPYVNNVPHLGNIIGCVLSADVFSRYGRLRGWN
LLYVCGTDEYGTATENKALEEGLTPQQICDKYFAIHDAIYKWFQIDFDYFGRTTTQQQTE
ISQNIFFRLLERGFLQEDTVEQLRCEHCQRFLADRFVEGVCPHCKYPEARGDQCDKCGRL
INAVELKDPLCKVCGKTPVIRTSKHLFLNLPKLEGELEKWLEQSFSTGDWTANAKQITRS
WLRDGLKPRCITRDLKWGTPVPLEEYRDKVFYVWFDAPIGYLSITANYTSDWEKWWKNPQ
QVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFG
DMAKDTGIPSDVWRFYLTYVRPEGQDSSFSWADLALKNNSELLNNLGNFINRAGMFVSKF
FNGCVPEIVLQDEDKRIIAQVAWELKQYIQLLDKVRIRDALKCVLNVSRHGNQYIQINEP
WKKIKGGDEDRKRAGTVTSVSVNVACLLSAMLEPYMPTVSQTIRTQLQAPDNCASAMLGA
EGYFLRSLPTGHRIGTVSPLFQKLDSEQIEILRKKFGGQQGPSKKSSTTETKPPTAAEHI
ANQRKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtttgtgagtgaaggcaacccgcagtgtgtgaaagtgctagcagcgctcgag
cacactggagtgaaatgtgacttgcagcttctcggccacgaggaaaaggtggtgtccttc
ctaagtcgcccggtcctgcctgctgtgctgttacccagcggccagcagcttttcagtgcg
aatgccatctgccaatatctgttcgaggttggtgggaaagagatcactgatactagcagg
cagttattggaatgggaagcgactgaattgcagcccgtgctgcttcaggcacttcatgtg
gcagtgctccaggggaagagcagtgaggccggcacactgctgaaggtgactctgagctgg
ctggagcagtttctcagtggaaaatccacacagttcctaactgcagagacagtggaagtg
gcggacattgtcttgtggtcagcattgtaccccattctgtctgactctgatctgaatgca
ggtgagctgcatttggttcgaggttggtttaagcgtgtaagccagctccccgcatgcacc
aaagcagtgcaggcgattctgccaggcaaagcgcttagtgctctgaagaatttccttcaa
aagcagccagctttacacacacagcgaagggaaaacctacccagtgagaccgaagaggct
gagcatgtgatgaccgaagaggagattgaggtagctggtcagacctttagcggaggcctg
gcagagagccgtgttaccgtagaaaggaaacaccctgtattacccaaggaagggaagcgt
aatgtgctggtcaccagtgcactgccgtatgtcaacaacgtgcctcacctcggcaacatt
atcggttgcgtgctcagcgctgatgtattctccagatatggccgtttgcgtggctggaac
ttgctgtatgtgtgcgggacagatgagtacggcactgcaacagagaacaaggctctcgag
gaaggtctaacacctcaacaaatatgcgacaaatactttgccatccacgatgccatctac
aagtggttccagatcgactttgactattttggccgcaccacaactcaacaacagacagag
atttcacagaacatcttcttccgtttgctcgagcggggctttctgcaagaggacacggtg
gagcagctgcgctgtgagcactgccagcgcttccttgcggaccgctttgttgagggtgtg
tgtcctcactgcaaataccccgaagccagaggggaccagtgtgacaaatgcggccgactc
attaatgcggtggagctgaaggatcctctgtgtaaggtgtgcggaaagactcctgtgatt
cgcacgtctaagcatctgtttctcaacctgcccaagctggaaggcgagttagagaaatgg
ctggagcagtctttcagtactggtgactggacagcgaatgctaagcaaatcacacgctca
tggttaagggatggtctgaagccacgctgcatcacacgagacctgaagtgggggacacct
gtaccactcgaagaatatagggacaaggtgttttatgtctggtttgatgcccccatcggc
tacctctccattacagccaactacaccagtgattgggagaagtggtggaagaacccacaa
caggtggagctgtacaacttcatggcaaaagacaacgttccattccacagcgtagttttc
ccctgctctctgctcggagcacaggacaactacactctcgtcaacaatctcatcgctaca
gaatatttgaactatgaggacacaaagttctctaagagccgtggtgtgggagtgtttgga
gacatggctaaagacacaggcattccatccgacgtttggcgtttctacctcacctacgtg
agacccgagggccaggactcgtctttctcctgggccgacctggcactgaagaacaattcc
gaactgctcaataacctgggcaattttatcaacagggcgggcatgtttgtgagtaagttc
tttaatggctgtgtgccggagatcgttctgcaggatgaagacaagcgtatcattgctcag
gtggcctgggagctcaagcagtacatccagttgctggacaaagtcaggattcgtgatgcc
ctgaaatgcgttctgaacgtctctcgtcatggcaaccagtatattcagataaatgaaccc
tggaagaagatcaaaggaggagatgaggacaggaaacgtgcaggcactgtaactagtgtg
tcggtgaatgtggcgtgtctcttgtcggccatgttggagccgtacatgcccacagtcagt
cagaccatccgtacccagctgcaagctccagataattgtgccagtgccatgctgggtgct
gagggatatttcctccgcagcctcccaaccggccaccggatcggaacggtcagtcctttg
ttccagaagctggattctgagcaaattgagatactgaggaagaaatttggaggacaacag
ggtccaagtaaaaagagcagcacaacggagaccaaacctcctactgccgcagaacatatt
gcaaatcaaagaaagaagtga
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