Silurus meridionalis (southern catfish): 124386339
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Entry
124386339 CDS
T08004
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124386339 (aff2)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124386339 (aff2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
124386339
NCBI-ProteinID:
XP_046706066
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Position
5:complement(5432585..5678926)
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AA seq
1259 aa
AA seq
DB search
MDLFELDFFREWELEQQCHYEQDRSALKKKEWERRTQEVQQDEDLFSTGFNLFGEPYKTN
KGDALANRVQNTLGNYDEMKELLTSHSNQSHLVGIPKNSVPQTPVEKNDQPSFFTEAQRG
RAASTQPANHTTSMPPPPTTNMAGPSILHGHQSTKKSRSSEWSRGAHGSSSSQAAQAASR
GKQISSGHEQEQGDSSPGTSSTSTHPSRRHGQTAKVPTVANSPCEQDSGSPVASTSLVPS
GLSTPTFPQGLHCKPSSGGQQKPTAYVRPMDGQDQAPNDSPELKPTLEITDGYGGAPFTS
LMDGKGSTVGSKGKLPKLTLPQSGEVSLPNDSSCVEEILREMTHSWPPPLTAIHTPGKAE
QTKFPIPNKDPQHVTPAYIGQKRCNVPGNKPSTKPVPQKSMLEDDLKISSDEEDSEQAAE
KPKTRSTPPNLPGPTPRSSDPGGHSSGASGSSSESESSSESDSDSESSSSDSECNRASRA
ATPEPEPPSTNKWQLDKWLNKVNPHNKPLANTQSESHKLVGSQPEDGQATENQICSKSKP
SAALAQADPKDRALLSPIREKAKPKTGQKGPDGKGTKIKPPPSVDLPPSRRSTGKKQPKK
VEQSSTSEEHNWPRPVNSSTTPKEKEPPPLEPPKPRGKAPGGKTAPRKEPRSTTVTIPAA
PTPSAINTAPDKKKHRGPSKIIPKSKEFIETESSSSECHSDPEDLSKIHHPCPGPSSLNF
KSKDCNSNILSVSSLASTSSTSIPDPAASDLLEEPLFSPISMVQNELLSPLQDFEDIKSL
WVKIQLSLLSRIPGQDPPEPLPAKTECRESNFKHRRQQSPGSIPLEKPTSKSKRKHKSDH
CEVLSGTKKLKLEKEALLPPCISPIHNHKISNTKDSSKKQPRKLLPPLLSPLSDEPMGRQ
RRSSESSSFSMEGSTQPLPVALPPTHSLPPSSSSSSSSSCHKHRKGESKSHSKTSSQEED
SHTKISGGFLANGQAESNVWPNSSSLSMDNMEHRRPKLTFNNTVHNADYYMQEAKKLKHK
ADALMEKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFTS
HSATLAEKKLAVLCNRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKNSAKSSQAPSPWGSN
GKTTGTPSPMSLSPSPISSVNSNTGAMVSSSSSSSSSSGSVAIPQRIHHMAASHVNITNN
ILRSYEHWDTADKLAHESQEFFQELDSVMEPLTQHSSMTDLVRYIRQGLHWLRIEAHLL
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagctggacttcttcagggagtgggagctggagcagcaatgccattat
gaacaagaccgttcggcactaaaaaagaaggaatgggagcgtcgcacacaggaagtgcag
caggacgaagatttgttctccaccggcttcaatctgttcggcgagccatacaagacaaac
aaaggtgatgcccttgccaaccgagtacagaacacgttgggcaactatgatgaaatgaaa
gaactcttgaccagccattccaatcaaagtcacctggtgggaatccctaagaactcagtt
ccgcagaccccggtggaaaaaaacgaccagcccagtttttttaccgaagctcagcgtggc
agagccgcctcaactcagccagcgaaccacaccacctcaatgcctcctccacccaccacc
aacatggcaggtccaagcattcttcatgggcaccagagcaccaaaaagtcccgatcttcc
gaatggtcccgaggggcgcatgggtcgagtagcagccaggcagctcaggctgccagccgg
ggaaagcagatctccagtgggcatgaacaggaacaaggtgactcgagccctggcacctcg
tccacctctacacaccccagcaggaggcatgggcagacggccaaggttccaactgttgcc
aattcaccctgcgagcaggactcggggtcacctgtggcctctacttctctggtacccagt
ggcctgtcgacaccaacattcccccagggcctgcactgcaaacccagtagtggaggacag
cagaaacccacagcgtatgtacggcccatggatggccaggaccaggcacctaatgactct
ccggagctcaagcccactctggaaatcacagatggatatggtggagcaccatttacaagc
ctgatggatggcaaaggcagcacagtagggagcaagggcaaacttcccaagctgactctc
cctcaatcaggggaggtcagtctgcccaacgactccagctgtgtggaggagattttgcgg
gaaatgacccattcttggcctccacccctcactgccatacacacaccaggcaaagcggaa
cagaccaagtttccaattcccaacaaggacccccaacacgttacaccagcgtacattgga
caaaagcgctgcaacgttcctggtaacaagccctcgaccaagccggtgccacagaagtca
atgcttgaagatgacctgaagatcagcagtgacgaagaagacagtgagcaggctgcagag
aaacccaaaaccaggagcacacctccaaaccttccggggcctacaccacggagcagtgat
ccaggtggccactccagcggggcttctgggagttccagcgaatcagaaagcagctctgag
tctgattccgacagcgagagcagttccagtgacagcgaatgcaaccgagcgtcccgcgcc
gctacaccagagcccgaaccaccatcaacaaacaagtggcagttggataaatggttaaac
aaagtcaaccctcacaacaagccccttgctaacacacaatcagaaagccataaacttgta
ggctcccagcctgaggatggccaagctacagagaaccaaatctgtagtaagagcaagccc
agcgcagctttggcacaagccgacccaaaagaccgggccttgctcagtcctatccgagaa
aaggccaagcctaaaacaggtcaaaagggtcctgatgggaagggtaccaaaataaagcca
ccaccttcagttgatctgcctccttccaggagaagcacaggcaagaaacaaccgaagaaa
gttgaacagtcctcaaccagtgaggagcacaactggcccagaccggtcaactccagcact
acaccaaaagaaaaagaacctccacctttagaaccacccaaacctagaggcaaagcccca
gggggcaagactgcccccagaaaagaaccccggtcaactacagtaaccattcctgctgcc
cccaccccctctgctatcaacacagctccagacaaaaagaagcacagagggcctagtaaa
atcatcccaaagtcgaaggagtttattgaaacggagtcgtcctcatcagaatgccactcg
gaccctgaggacctttcaaaaatacatcatccctgccctggccctagcagcctgaacttt
aaatccaaggactgtaacagcaatatcctaagtgtcagcagtcttgccagcaccagcagt
acctctataccagacccagctgccagtgacctgttggaggagcctctgttctcccctatt
tcgatggtacagaatgagcttttgtcaccactgcaagactttgaggacattaagtccctg
tgggttaagattcagcttagcctcctgtcgcggattccagggcaggatccacctgagcca
ctccccgccaagaccgagtgtcgagagtccaatttcaagcacaggaggcagcagtcacca
ggctccatccccttagaaaaacccaccagcaagtcaaagaggaaacacaagtcagatcat
tgtgaggtgttgagtggaaccaagaagttaaaactggagaaagaagccctgctcccaccc
tgtatctctcccatccataaccacaagatctccaacacaaaagactcttcgaaaaagcag
ccgaggaagctccttccaccgttgctctccccactctcagacgagcccatgggtcgccag
cgaagaagcagcgagagcagctcttttagtatggaaggaagcacacaaccccttcctgta
gccctcccccccacgcactcgcttccaccttcttcctcgtcatcgtcctcgtcatcgtgt
cacaagcaccgcaaaggcgaaagcaagtctcattccaagaccagcagccaggaggaagac
agccacacgaagatctccgggggtttcctcgccaatggtcaggccgaatcgaacgtgtgg
ccgaactcttcatctttgtccatggacaatatggagcacaggagacctaaacttacattc
aacaacactgttcacaatgcggactactacatgcaggaagccaagaaactaaagcacaaa
gctgatgcgctgatggagaagtttggcaaagctgtcaattatgcagacggcgcgctctcc
ttcatcgagtgcggcaatgccatggaacgagacccgttagaagccaagtcgccgtacacc
atgtactcggaaactgtggagctcattaggtatgcaatgagattaaagaacttcaccagt
cactcagccacgctggcggagaagaaattagcggtgctgtgcaatcgctgtttatccctg
ttgtacttgcggatgttcaagctgaagaaggatcacgcgatgaagtactcacgctcctta
atggagtacttcaagaattcagcgaaaagttcacaagcaccttcaccgtggggctccaat
ggaaagactacaggaacaccatctcccatgtccctgagtccttccccgatcagctcggtc
aacagtaacactggagcaatggtatcttcctcctcgtcctcttcctcgtcttcgggcagt
gtggcgatcccgcagcgcatccaccacatggctgccagccacgtcaacatcaccaacaac
attctgcgcagctacgagcactgggacacggccgacaagctggctcacgagagccaagag
ttttttcaggagttggactcggtgatggaaccactgacgcagcacagcagcatgacagac
ctggtgcgctacattcgccaaggactgcactggctccgcattgaggcccatttgttatag
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