Silurus meridionalis (southern catfish): 124386425
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Entry
124386425 CDS
T08004
Symbol
psma1
Name
(RefSeq) proteasome subunit alpha type-1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124386425 (psma1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124386425 (psma1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smeo03051
]
124386425 (psma1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124386425 (psma1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
124386425 (psma1)
Peptidases and inhibitors [BR:
smeo01002
]
Threonine peptidases
Family T1: proteasome family
124386425 (psma1)
Proteasome [BR:
smeo03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
124386425 (psma1)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124386425 (psma1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
124386425
NCBI-ProteinID:
XP_046706223
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Position
5:complement(28811591..28816748)
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AA seq
262 aa
AA seq
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MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSRTHAVLVALKRAQSELAAHQ
KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT
QRYGRRPYGVGLLIAGYDDIGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERHMENFS
TCNLNELVQHGLCALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVAPFLEGLEERP
QRKLVQPADDVAPSASDEPMEH
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaaaccagtatgataatgatgtgacggtgtggagtcctcaggggcgaatccac
cagattgagtacgccatggaagcagtgaagcagggctcagctactgtggggctcaaatca
cgcacacatgccgtgctggtggcactgaagagggctcagtctgagcttgctgctcatcag
aagaagatcctccatgtggataatcatatcggtatttccatcgctggactaactgcagac
gctcgactgctctgtaacttcatgcgccaggagtgtctggattccaggtttgtgtttgat
cgtccactgcctgtgtctcgtctcgtctcacttatcgggagcaaaactcagattcccaca
cagcgttacgggaggagaccatacggagtcggccttctgatcgcaggctacgatgatatt
ggtcctcatatatttcagacttgtccatctgcaaactactttgactgtaaggccatgtcc
atcggagcacgctcacaatctgcacgcacttacctggagagacacatggagaacttctcc
acctgtaatctgaacgagcttgtgcagcacggcctgtgtgctcttagagagactctccct
gctgaacaggacctcaccaccaagaacgtgtcgattgggattgtgggtaaagatctggag
tttactatctatgacgatgatgatgtggctccattcctcgagggattagaggagagacct
cagaggaagcttgtccagccagctgatgacgtggctccgtctgcctctgatgagccaatg
gaacactga
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