Silurus meridionalis (southern catfish): 124386427
Help
Entry
124386427 CDS
T08004
Symbol
ntn1a
Name
(RefSeq) LOW QUALITY PROTEIN: netrin-1a
KO
K06843
netrin 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124386427 (ntn1a)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Axon guidance molecules
124386427 (ntn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
124386427
NCBI-ProteinID:
XP_046706229
LinkDB
All DBs
Position
1:425839..489018
Genome browser
AA seq
594 aa
AA seq
DB search
MMLVLGVLLAALCRPSVQALASSSPPDPCYEESGHARRCIPDFVNAAFGREVRATSTCGQ
KAPSRYCVGPERGGGERSRECRMCDASDPKRRHPASYLTDLHNPHNLTCWQSENGVRYPH
NVTLTLSLGKKFEVTYVSAQFCSVRPDSMAVFKSMDYGKTWVPFQYYSSQCRKVYNKPNR
AAITKQNEQEAVCTDAHQQQQPVSGGLVAFSTLDGRPSAHDFDNSPVLQDWVTATDIRIT
FSRLHGEERRTEAGDEDEDESHFYAVSDVQVGGRCKCNGHASRCVRDRTGELVCECRHNT
AGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLN
CRHNTAGRHCHYCKEGYYRDMSKPITHRKACKACDCHPVGAAGXTCNQTTGQCPCKDGVT
GITCNRCAKGYQQSRHPXRPCIKIPAAPPTTTASVTEQPADCESYCKASKGKLKINMKKY
CKKDYAVQVHMLKSEKAGEWWKFTVNIVSVYKQSESRIRRGDQLLWVRAKDVACKCPRMK
MGKKYLLLGNNEDAPGQSGMVADKGSLVIQWRDTWARRLRKFQQREKKGKCKKP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagtgctcggtgtgctgctcgcggcgctctgtcggccctctgtgcaagcgctc
gcgagctcgtcgccaccggacccgtgctacgaggaaagcgggcacgcgcgccgctgcatc
ccggacttcgtgaacgccgcttttggccgcgaggtgcgtgcgaccagcacgtgcggccag
aaggcaccgagccgctactgcgtggggccggagaggggcggcggggagcggagccgcgag
tgccgcatgtgtgacgcgtcggaccccaaacggcgccatccggcttcgtacctcaccgac
ctgcacaacccgcacaacctgacgtgctggcagtcggagaacggagtccggtacccgcac
aacgtcaccctgacactgtccctcggcaagaagttcgaggtgacctacgtgagcgcacag
ttctgctcggtccgcccggactcgatggccgtctttaagtcaatggactacggcaagacg
tgggttccgttccagtactactcgagccagtgccgaaaagtgtacaacaaaccgaaccgg
gccgccatcaccaagcagaacgagcaggaggccgtgtgcacggacgcgcaccagcagcag
cagccggtctccggcggtctcgtggccttcagcacgctggacggccgaccgtctgctcac
gacttcgacaactcgccggtgctgcaggactgggtcacggccacggacattcgcatcacc
ttcagccgcctgcacggcgaggagcgcaggacagaggcgggggacgaggacgaggacgag
tcgcacttctacgccgtgtccgacgtgcaggtaggcggccggtgcaagtgtaacggacac
gcctcgcgctgcgtgcgcgaccgcaccggagagctcgtgtgcgagtgcaggcacaacacc
gcgggacccgagtgcgacaggtgcaaaccgtttcactacgaccggccgtggcaacgcgcg
accgccagggaggccaacgagtgtgtggcatgtaactgtaatctccacgctcggcgctgc
aggtttaacatggaactgtataaactgtcggggaggaagagtggaggcgtctgtctgaac
tgtcgccacaacacggccggacgccactgtcactactgtaaagagggttattacagagac
atgagcaaacccatcactcacagaaaagcctgcaaagcatgtgactgtcaccctgtcggt
gctgcagganaaacgtgtaaccaaacaacgggtcagtgtccgtgtaaagacggcgtgacg
ggaatcacgtgcaaccgctgcgctaaaggctaccaacagagccgccacccanntcgcccc
tgcatcaaaattccagctgcaccaccaacaaccacagcgagcgtcacagagcagcctgca
gactgtgagtcctactgcaaagcatccaaagggaagctgaagatcaacatgaaaaagtac
tgcaagaaagattatgctgtccaggtgcacatgctgaagtcggagaaggcgggcgagtgg
tggaagttcacagtgaacatcgtgtcggtgtataagcagagcgagagcaggatccggaga
ggagaccagctgctgtgggtccgagccaaagacgtggcctgcaagtgtcccagaatgaag
atggggaagaagtacctgctgctggggaacaacgaggacgccccggggcagagcggtatg
gtggcagataagggcagtctggtcattcagtggagggacacgtgggcacggagactccgc
aagttccagcagagagagaagaaaggcaaatgcaagaaaccataa
DBGET
integrated database retrieval system