KEGG   Silurus meridionalis (southern catfish): 124386427
Entry
124386427         CDS       T08004                                 
Symbol
ntn1a
Name
(RefSeq) LOW QUALITY PROTEIN: netrin-1a
  KO
K06843  netrin 1
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:smeo00536]
    124386427 (ntn1a)
Glycosaminoglycan binding proteins [BR:smeo00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   124386427 (ntn1a)
SSDB
Motif
Pfam: Laminin_N NTR EGF_laminin EGF_LMN_ATRN BNR_6
Other DBs
NCBI-GeneID: 124386427
NCBI-ProteinID: XP_046706229
LinkDB
Position
1:425839..489018
AA seq 594 aa
MMLVLGVLLAALCRPSVQALASSSPPDPCYEESGHARRCIPDFVNAAFGREVRATSTCGQ
KAPSRYCVGPERGGGERSRECRMCDASDPKRRHPASYLTDLHNPHNLTCWQSENGVRYPH
NVTLTLSLGKKFEVTYVSAQFCSVRPDSMAVFKSMDYGKTWVPFQYYSSQCRKVYNKPNR
AAITKQNEQEAVCTDAHQQQQPVSGGLVAFSTLDGRPSAHDFDNSPVLQDWVTATDIRIT
FSRLHGEERRTEAGDEDEDESHFYAVSDVQVGGRCKCNGHASRCVRDRTGELVCECRHNT
AGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLN
CRHNTAGRHCHYCKEGYYRDMSKPITHRKACKACDCHPVGAAGXTCNQTTGQCPCKDGVT
GITCNRCAKGYQQSRHPXRPCIKIPAAPPTTTASVTEQPADCESYCKASKGKLKINMKKY
CKKDYAVQVHMLKSEKAGEWWKFTVNIVSVYKQSESRIRRGDQLLWVRAKDVACKCPRMK
MGKKYLLLGNNEDAPGQSGMVADKGSLVIQWRDTWARRLRKFQQREKKGKCKKP
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgatgttagtgctcggtgtgctgctcgcggcgctctgtcggccctctgtgcaagcgctc
gcgagctcgtcgccaccggacccgtgctacgaggaaagcgggcacgcgcgccgctgcatc
ccggacttcgtgaacgccgcttttggccgcgaggtgcgtgcgaccagcacgtgcggccag
aaggcaccgagccgctactgcgtggggccggagaggggcggcggggagcggagccgcgag
tgccgcatgtgtgacgcgtcggaccccaaacggcgccatccggcttcgtacctcaccgac
ctgcacaacccgcacaacctgacgtgctggcagtcggagaacggagtccggtacccgcac
aacgtcaccctgacactgtccctcggcaagaagttcgaggtgacctacgtgagcgcacag
ttctgctcggtccgcccggactcgatggccgtctttaagtcaatggactacggcaagacg
tgggttccgttccagtactactcgagccagtgccgaaaagtgtacaacaaaccgaaccgg
gccgccatcaccaagcagaacgagcaggaggccgtgtgcacggacgcgcaccagcagcag
cagccggtctccggcggtctcgtggccttcagcacgctggacggccgaccgtctgctcac
gacttcgacaactcgccggtgctgcaggactgggtcacggccacggacattcgcatcacc
ttcagccgcctgcacggcgaggagcgcaggacagaggcgggggacgaggacgaggacgag
tcgcacttctacgccgtgtccgacgtgcaggtaggcggccggtgcaagtgtaacggacac
gcctcgcgctgcgtgcgcgaccgcaccggagagctcgtgtgcgagtgcaggcacaacacc
gcgggacccgagtgcgacaggtgcaaaccgtttcactacgaccggccgtggcaacgcgcg
accgccagggaggccaacgagtgtgtggcatgtaactgtaatctccacgctcggcgctgc
aggtttaacatggaactgtataaactgtcggggaggaagagtggaggcgtctgtctgaac
tgtcgccacaacacggccggacgccactgtcactactgtaaagagggttattacagagac
atgagcaaacccatcactcacagaaaagcctgcaaagcatgtgactgtcaccctgtcggt
gctgcagganaaacgtgtaaccaaacaacgggtcagtgtccgtgtaaagacggcgtgacg
ggaatcacgtgcaaccgctgcgctaaaggctaccaacagagccgccacccanntcgcccc
tgcatcaaaattccagctgcaccaccaacaaccacagcgagcgtcacagagcagcctgca
gactgtgagtcctactgcaaagcatccaaagggaagctgaagatcaacatgaaaaagtac
tgcaagaaagattatgctgtccaggtgcacatgctgaagtcggagaaggcgggcgagtgg
tggaagttcacagtgaacatcgtgtcggtgtataagcagagcgagagcaggatccggaga
ggagaccagctgctgtgggtccgagccaaagacgtggcctgcaagtgtcccagaatgaag
atggggaagaagtacctgctgctggggaacaacgaggacgccccggggcagagcggtatg
gtggcagataagggcagtctggtcattcagtggagggacacgtgggcacggagactccgc
aagttccagcagagagagaagaaaggcaaatgcaagaaaccataa

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