KEGG   Silurus meridionalis (southern catfish): 124386437
Entry
124386437         CDS       T08004                                 
Symbol
stx5a
Name
(RefSeq) syntaxin-5a
  KO
K08490  syntaxin 5
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    124386437 (stx5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124386437 (stx5a)
Membrane trafficking [BR:smeo04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    124386437 (stx5a)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N Apolipoprotein HrpB7 DUF6746 DUF16 Syntaxin MCPsignal DUF2207_C KIF21A_4th Vac_Fusion DUF7260 NTF3_N
Other DBs
NCBI-GeneID: 124386437
NCBI-ProteinID: XP_046706236
LinkDB
Position
5:complement(18332455..18339034)
AA seq 302 aa
MTCRDRTLEFQSACKSLQGRQLQNGTLAKPNHNALKQRSDFTLMAKRIGKDLSNTFAKLE
KLTILAKRKSLFDDKAVEIEELTYIIKQDLNSLNKQIAQLQDLVRSRSGQNRRHIQTHSN
TIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQAPVSSSPLLANNFSSSVLMQ
DESRSLGSDVVIDMDSRANPLQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHM
VKEQEETVQRIDSNVEDTQLNVEMAHTEILKYFQSVSSNRWLMIKIFLVLVVFFIIFVVF
LA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgacttgcagagatcgcactctggagttccagtctgcctgcaaatctctgcaggggaga
cagttacagaatggtacattggcaaaaccgaaccacaatgctcttaaacagcggagtgac
ttcacactcatggcaaagaggattggaaaagacttgagtaacacttttgctaaactggaa
aagctcacaatcttggccaaaaggaaatctttgtttgacgacaaggctgtggagatcgaa
gagttgacctacatcataaaacaggacctcaacagtttaaataaacagatagcacagctg
caggacctggttcgctcccgaagtggacaaaatagacgccacattcagacacattccaac
acaattgttgtctctctccagtcaaagttggcatcgatgtcaaacgatttcaagtctgtg
ttggaagtgagaacagagaatctgaaacagcagcgcagcagaagagaacagttctcccag
gcgccggtgtcctcctcacctcttcttgccaacaacttcagtagctcggtattgatgcag
gatgaatctagaagccttggcagcgatgtggtcattgacatggattcaagagccaatcct
ctccaactgcagcttattgatgaacaggactcatacatccaaagtcgagcagacaccatg
cagaacattgagagcacaattgtggagctgggctccatcttccaacagctggcgcatatg
gtgaaagagcaggaggagactgtacagaggattgattccaacgtggaggacactcagctg
aacgtggaaatggcccacactgagatcctcaaatactttcagtctgtctcctccaaccgc
tggctcatgattaagatattccttgtactggtggtcttcttcatcatatttgtggtcttc
cttgcctga

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