Silurus meridionalis (southern catfish): 124386440
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Entry
124386440 CDS
T08004
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124386440 (gabra4)
04082 Neuroactive ligand signaling
124386440 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124386440 (gabra4)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
GABA-A
124386440 (gabra4)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124386440
NCBI-ProteinID:
XP_046706241
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Position
5:complement(17563647..17596583)
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AA seq
556 aa
AA seq
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MQKMVSAKKETVIAMCPTYISTLFYFLCVTACIKKISGQVKKDEKLYPENFTQILDQLLE
GYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTIDVFFRQTWEDRRLRYEGPIEIL
RLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLV
DFPMDGHSCPLKFGSYAYPKTEMIYTWTKDSVEVPDESSSLVQYDLIGHTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQMERAKKKETKNAA
TAAAKSFVSSGKDTEEILQQNSDTNGNLRKRVNSTTQSLPDPKGSQRNESGSRISTAMSK
ELQTSQLSSSSSTTGSSSGLTRLHSKSFTQSKALAPVSTSKTTPPAPPSTPTVPELSTAN
TPTSSGSLHHLIAPKLENMQKTDAKAASSAQPTASTGGASKIDKYARILFPVSFGAFNMV
YWVVYLSKETMEARGV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatggtctcggccaagaaggagacggtgattgcgatgtgccccacttacatt
tccacactcttctactttctgtgcgttacggcttgcattaagaaaatctcaggtcaggta
aagaaggatgagaagttataccctgaaaatttcacccagatcttagaccaacttctggag
ggttatgacaacagactgcgccctggattcggcggtccagtgactgaggtaaagactgat
atctacgtcactagttttggcccggtatctgatgtggaaatggagtacacaatagatgtg
tttttcagacagacatgggaagaccggcgactaagatatgaaggaccaatcgaaattttg
cggctgaacaacctgatggtgaccaaagtgtggactcctgatacctttttcagaaacggg
aaaagatctgtggctcacaacatgactgccccgaataaactgttccgcataatgaaaaat
ggcactatcctttacaccatgaggttgacaatcagtgcagagtgtccaatgaagctagtg
gattttcctatggatggccattcctgtccacttaagtttggcagctatgcttaccctaag
actgagatgatctacacatggaccaaggattcagtggaagttcctgatgaatcgtccagc
cttgttcagtatgatctgattggacatacggtctccagtgaaacagtcaagtctattaca
ggtgaatatgtggtgatgactgtctacttccacttgaaacggaaaatgggctacttcatg
attcagacatacatcccatgcatcatgacagtaatcctttcccaagtgtccttctggata
aataaggaatctgtgcctgccagaactgtcttcggtatcaccactgtcctcaccatgacc
actctaagcatcagcgcccgtcactctctgcctaaggtctcctatgctacagccatggac
tggttcattgccgtgtgttttgcctttgttttttcggccctcattgagttcgctgccgtg
aattatttcacaaatgtacaaatggagcgagcaaaaaagaaagaaaccaagaatgcagcc
actgctgctgccaagagctttgtgtcatctggcaaagacactgaggagattctacaacaa
aactccgacactaatggcaacctacgcaaacgtgtaaactccacgactcagtctctgcct
gaccctaagggcagccaaagaaatgaatctggcagcaggatttctacagccatgtccaaa
gagctccagacaagccaattatcttctagctcaagtacaacaggcagctcctcgggccta
acacgactccattccaaatccttcacccaatccaaagcacttgctccagtatcaacttcc
aaaaccaccccccctgctccaccttcaacgccaacagtccctgagctttcgacagccaac
acgcccaccagctctggctctctacaccatcttatagctccaaaattggagaatatgcag
aaaacagatgccaaggctgcatccagtgctcagccaacagcttctacaggcggggccagc
aagattgataagtatgcacgcatcctttttccagtgtcctttggggcattcaacatggtg
tactgggttgtatatttatccaaagaaaccatggaagcaagaggagtctaa
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