KEGG   Silurus meridionalis (southern catfish): 124386455
Entry
124386455         CDS       T08004                                 
Symbol
cetn2
Name
(RefSeq) caltractin
  KO
K10840  centrin-2
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    124386455 (cetn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124386455 (cetn2)
   03036 Chromosome and associated proteins [BR:smeo03036]
    124386455 (cetn2)
   03400 DNA repair and recombination proteins [BR:smeo03400]
    124386455 (cetn2)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     124386455 (cetn2)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    124386455 (cetn2)
   Centrosome duplication proteins
    Centriole replication proteins
     124386455 (cetn2)
DNA repair and recombination proteins [BR:smeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      124386455 (cetn2)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF_EFCAB10_C EH SurA_N_3 SUB1_ProdP9 Dockerin_1 EF-hand_14 DUF7645 SRI MgtE_N TRCF MJ1010-like_2nd
Other DBs
NCBI-GeneID: 124386455
NCBI-ProteinID: XP_046706263
LinkDB
Position
5:8854485..8857563
AA seq 172 aa
MATGAKRPSLGAVATRKKASPKPELTEEIRQEIREAFELFDTDGAGYIEVKELKVAMRAL
GFEPKKEEIKKMIVDVDKDGTGKISFDHFLAVMSQKMAEKDSKEEILKAFRLFDDDETGK
ISFRNLKRVAKELGENLTDEELQEMIEEADRDGDGEVSQQEFLRIMKKTCLY
NT seq 519 nt   +upstreamnt  +downstreamnt
atggccaccggcgccaaaaggccatcacttggagctgtggctactcgtaagaaagccagt
cctaaacctgaactgacagaagaaataaggcaggagatccgagaagcttttgagctgttc
gacacagacggcgcaggctatatcgaggtgaaggagctcaaggttgctatgagggcgctc
gggtttgaacccaaaaaagaggagatcaagaaaatgattgtagatgtagataaggatgga
actggcaagatctcatttgatcacttcctggcagtcatgagccaaaagatggctgaaaag
gactccaaagaagaaatcctcaaggcctttcgactgtttgacgatgatgaaaccggtaag
atatcgttccgcaacttaaagcgagttgccaaagagctcggtgagaaccttacagacgag
gagcttcaggagatgattgaagaagcagaccgagatggcgacggggaagtgagccagcag
gagtttcttcgtatcatgaaaaaaacatgtttgtactga

DBGET integrated database retrieval system