Silurus meridionalis (southern catfish): 124386460
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Entry
124386460 CDS
T08004
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124386460
04082 Neuroactive ligand signaling
124386460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124386460
Ion channels [BR:
smeo04040
]
Ligand-gated channels
GABA-A
124386460
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
124386460
NCBI-ProteinID:
XP_046706268
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Position
5:complement(17495817..17543757)
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AA seq
455 aa
AA seq
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MREKLFTFHHLVLGVSLTILWGTRSVSADTSTDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRVTTVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFEGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTTTEVTYTWTKNASNSVVVEGESSRLNQYDLLGQTVGNETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEKASV
IKKNNAYAVAVANYAPNITKDSVLPTIAKGGVAETGKTKSESKPTENKKTFNSVSKIDRM
SRIMFPVLFGTFNLVYWATYLNREPVIKDMVPSNQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaagctgtttacgtttcaccacttggtgcttggcgtctccttaacgatcctt
tggggcacaaggtcagtaagtgcagacacctcaaccgatgccttcaaaaacaacatcacc
ctctttacacgcatcttggacagacttctggatggctacgataaccggctcaggcctgga
ctaggagaccgggtcaccacagtaaagactgatatctacgtcaccagttttggtcctgtt
tcagacactgatatggaatacacaatagatgtgttcttcaggcagagctggaaagatgag
aggttgaagttcgaaggaccaatgaacatcctgcgtctcaacaacctgatggccagcaaa
atctggactccagacactttttttcataacgggaagaaatcagtggcacacaacatgact
atgcctaataagcttttgcgtatccaggatgacggcactctgctttacactatgagattg
actgtgcatgcagagtgtccaatgcatcttgaggattttcccatggatttccactcctgt
cctcttaaatttggcagctatgcatacacaacaaccgaggtgacatatacctggacaaag
aatgcctcaaactcagtggtggtggagggtgagagctccagattaaaccagtacgaccta
ctgggacagactgttggcaacgagacgattaaatccagcactggggagtacacagtaatg
acagctcacttccatctgaagaggaagattggttattttgtgattcagacatacctccct
tgcatcatgacggtcatcttatcacaggtctccttttggctcaatcgtgagtccgtgcct
gccagaacggtgtttggtgtgacaactgtgctgaccatgacaactctgagtattagtgcc
cgtaactcactccctaaagttgcctacgccaccgccatggactggttcatagctgtgtgc
tacgcatttgtcttctcagcccttattgaattcgcaactgtcaactacttcaccaaacgt
ggctgggcatgggacggcaagagcgtggtcaatgacaagaagaaggagaaagcctctgtg
atcaagaaaaacaatgcgtacgcagtggctgttgcgaactacgctcccaatatcacaaag
gactctgtcttgcccaccattgctaaaggcggggtcgcagaaacaggcaagaccaaaagc
gagagcaagccaaccgagaacaagaaaaccttcaatagcgtgagtaagatcgaccgtatg
tcccgcatcatgttccctgtcctctttggaaccttcaatctggtttattgggccacctat
ttaaacagagaacccgttatcaaggacatggttccttctaaccaatga
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