Silurus meridionalis (southern catfish): 124386483
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Entry
124386483 CDS
T08004
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124386483 (lingo2)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124386483 (lingo2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
Ig_3
I-set
ig
Ig_2
LRR_9
V-set
LRR_RPS2
LRR_Zer-1
LRRNT
Ig_C17orf99
Ig_6
Motif
Other DBs
NCBI-GeneID:
124386483
NCBI-ProteinID:
XP_046706303
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Position
5:complement(1322000..1554001)
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AA seq
615 aa
AA seq
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MVDCLSRVMLHTAISCWQPLLGLALVAVFLGSALACPSRCECSAQSRSVICHRKRYPTIP
DGIPIETRILDLSKNRIQAINPDDFSVYPHVEELDLSGNIIAYVEPGAFNLLSSLHTLSL
KSNRIKLLSLGVFTGLSNLTTLDISDNKIVILVDYMFQDLHNLKSLDVGDNELVYISHRA
FNGLVSLESLTLERCNLTMVPTDALSHLHNLVSLHMRYLSISTLQPYSFKKLFRLSHLEI
DNWPSLDVFPANTLHGLNLTTLSVTNTNLSTFPYQALRHMPYLTHLNVSHSHIRTVEGGL
LQDLVRLRELRISAAQLVSVEPYAFQGLRWLRLLDVSHNRLQTLERGVFHTPEALEVLLI
NDNPLVCDCRLMWLLQKRHSISFGDEQPECNTPEGIRGRPFKEFKETLLSYYVTCTKPKI
RENRTQLVSVEEGQPAQLHCSADGTPRPIISWVTPRRRHLTTRSHGRVMVHNNGSLNIKA
VELQDGGVYVCVASNTAGNDTLMVSLAVKSLGSLYANRTQYYIDPNSTTANSTNSPNTTF
GLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNEASPEE
AEQTSGPRRFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggactgcctgagccgagtcatgttgcacacagctatatcttgctggcagccattg
ctgggactggccctggtggcagtcttcttaggttctgcccttgcctgcccttctcgctgc
gagtgctctgcccagagtcgctccgtcatctgccatcggaaacgttatccaaccatacca
gatggcattccaattgaaacacgtatcctggacctcagcaagaatcgcatccaggccatc
aatccggacgacttctctgtctacccacacgttgaagagctggacctgagtggcaacatc
attgcctatgtagaaccaggagcttttaacttactctctagtttacacacgctcagtctg
aagagcaaccgcatcaagctcttgtccctgggcgtgttcactgggctttcgaacctcacc
acactcgacattagtgacaataagatagtcattctggttgattacatgttccaggatttg
cataatcttaagtcattagatgtaggcgacaatgagctggtgtacatctcacaccgagca
ttcaatggcttagtttcactggagagtctgacactggagcgctgtaacctgaccatggtg
ccgacggatgccctgtcccaccttcacaatctggtgagcttgcatatgcgctacctcagc
ataagtacccttcaaccttactccttcaagaaactattccgtctaagccacctggagatt
gacaactggccttcactggatgtttttccagccaacactttgcatggcctgaacctcact
acgctttctgtcaccaataccaatctgtccacattcccctaccaggccctgcgtcacatg
ccttacctcacgcacctgaatgtgtcccacagccacatccgcactgtggaaggaggtctt
ctgcaggacctggtgcgtctccgtgagctgagaatatcagcagcccagctggtgtctgtg
gagccctacgctttccagggtctacgttggctcagacttcttgacgtgtcccataacagg
ctgcaaactttggagaggggtgtgttccacactccagaggctctggaggtgttgctcatc
aatgacaatcctctcgtttgcgactgtcgactcatgtggctgctgcaaaagcggcactcg
atctcatttggagatgagcaacccgaatgcaatactcctgagggaatccgcgggcgccct
ttcaaggagttcaaggaaaccctcttgtcttactacgtgacctgtaccaagcccaagatc
cgtgagaaccggacacagctggtgtcagtagaagaagggcagcctgctcagctacactgc
agtgctgatgggactcctcgccccatcatttcctgggtcacgccacgccgcagacatctg
accacccggagtcatggaagagtaatggtgcacaacaatggctcactcaatatcaaggca
gtggagcttcaagatggtggcgtgtatgtctgcgtggcctccaacacagcaggaaatgac
acgctcatggtttccttggctgttaagagtctgggctcgctttatgctaacaggacccag
tactacatagatcctaacagtactactgccaacagcaccaattcccccaacacaaccttt
ggcctcgatctaaagactatcctggtttcgacagcaatgggttgctttacattccttggt
gttgtcctgttctgttttctgctcctgtttgtatggagtcggggcaaaggaaagcacaaa
aacaacatcgatatagagtatgtgccacgctccaagtccaatgaggcctcgcccgaggaa
gcagaacagacctctggtcctcgacgctttaacatgaaaatgatttaa
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