Silurus meridionalis (southern catfish): 124386574
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Entry
124386574 CDS
T08004
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
KO
K05450
platelet derived growth factor C/D
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
smeo04510
Focal adhesion
smeo04540
Gap junction
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124386574 (pdgfc)
04020 Calcium signaling pathway
124386574 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124386574 (pdgfc)
04540 Gap junction
124386574 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124386574 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124386574 (pdgfc)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Growth factors (RTK binding)
124386574 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Neur
Motif
Other DBs
NCBI-GeneID:
124386574
NCBI-ProteinID:
XP_046706456
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All DBs
Position
5:1158568..1208876
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AA seq
352 aa
AA seq
DB search
MLNGTTERIQSIKLSQMIPLLLLSLLSSLLHGSEAESTLLSKLHHSNGKEHNGVQESQHE
KVVMVSGDGVVHSPGFPHTYPRSTVIAWRLVAANENARIQLIFDPRFGLEDPEDGVCKYD
YVEVEEPDGGMILGRWCGSHSAPGPQTSKGNQIRIRFLSDEYFPSEPGFSIHYSVLQQKS
SVPAVMPSALHNVEALSEAVSEFGTVEEVLKYLEPERWQLDLDELYKPTWHGLGKSFFHQ
KKNRGVVDLNLLREEVRLYSCTPRNYSVSLREELKRTDVIFWPSCLLVKRCGGNCACCSN
NCYECQCTPTKVTKKYHEVLMLKFRPGRGSQKSLTDVALEHHEECNCECKND
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgggaccacagagcgtatccagagcataaagctgagccaaatgattcctctt
cttctcctctctcttctgtcgtctcttcttcatgggtcggaggcggaatctacgctcctc
tctaagcttcaccactccaatggaaaagagcacaatggagttcaggagtctcagcatgag
aaggtagtgatggtgagcggggacggggtcgtccacagtcccgggtttccacacacttac
ccacgcagcactgtgatcgcgtggaggctcgtggcagccaatgagaatgccaggattcag
ctgatctttgacccccgcttcggcttagaggatccggaggacggcgtgtgcaagtacgat
tatgtggaagtggaggaacccgatggtggtatgatcctgggtcgttggtgtggctctcac
tctgctcctggtcctcagacgtccaaagggaaccagattcgcattcgcttcctttcagac
gaatactttccctctgagccaggtttcagcatccactactccgtgttgcagcagaagtcg
tccgtacctgccgtcatgccctcggctctgcacaacgtggaggctctgagtgaagccgtg
tctgaattcggcactgtggaggaagttctgaaatacctggagccggaacgctggcagctc
gacctggatgagctttacaagcccacatggcacggcctgggcaagtccttcttccaccag
aaaaagaacagaggcgtggtggatctgaacctgctccgggaggaggtccggctctacagc
tgcactcctcgtaattattcagtgtctctgcgtgaggagctgaagaggacggacgtgatc
ttctggcccagctgcctgctggtgaagcgatgtggtggaaactgcgcctgctgctccaac
aactgctacgagtgtcagtgcactcccactaaagtgaccaaaaaataccatgaggtcctg
atgctgaagttcagaccaggtcgtggctctcagaagtctctcacggacgtggccttggag
catcacgaggagtgcaactgcgagtgcaagaacgactga
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