Silurus meridionalis (southern catfish): 124386600
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Entry
124386600 CDS
T08004
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124386600 (rnf4)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124386600 (rnf4)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124386600 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf-RING_4
zf-rbx1
zf-C3HC4_4
zf_RING_Vps8
zf-RING_10
Sina_RING
zf-RING_11
zf-RING_6
zf-Nse
IBR_1
zf-ANAPC11
Rtf2
DZR
Motif
Other DBs
NCBI-GeneID:
124386600
NCBI-ProteinID:
XP_046706496
LinkDB
All DBs
Position
5:6904075..6909319
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AA seq
183 aa
AA seq
DB search
MSTTTQRKRRTSSTACSRRNSKRSRMQMSQASVETIDVLEGTRLSSEDVVDLTCEGSEPA
VVDLTNNDSVVLLDDGTQSRRMQGTESYVLSSDDEEEPSQSLNPALLSSLHASARARSTP
GAVSCPVCMDAYTEIIESGRLMVSTKCGHLFCSQCIRDSLARAHNCPTCRKKLTYKQYHP
IYI
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacgactcagaggaagagacgaacaagttccactgcatgttccagacgaaac
agcaaaagaagtaggatgcagatgtctcaggcctcagtggaaaccattgacgttctagaa
ggcaccaggttaagcagtgaagatgtagtagatttaacctgtgaaggatcagagccagct
gtggttgatcttacaaacaacgattcggttgtgcttttggatgatggtacacagagcaga
cgtatgcagggcactgaaagttacgtgctgagcagcgatgacgaggaagagccaagtcaa
agtcttaatccagctcttctgtcatcgctacacgcgagcgcaagagccaggtctacgcct
ggagcggttagttgccctgtatgcatggatgcttacacagagatcattgagagcggaagg
ctcatggtctccaccaagtgtggccacctgttctgcagccagtgcatccgtgactccctc
gcccgggctcacaactgcccaacatgcaggaagaaacttacttataagcagtatcaccct
atctatatctga
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