KEGG   Silurus meridionalis (southern catfish): 124386600
Entry
124386600         CDS       T08004                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smeo04121]
    124386600 (rnf4)
Enzymes [BR:smeo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124386600 (rnf4)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124386600 (rnf4)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-RING_4 zf-rbx1 zf-C3HC4_4 zf_RING_Vps8 zf-RING_10 Sina_RING zf-RING_11 zf-RING_6 zf-Nse IBR_1 zf-ANAPC11 Rtf2 DZR
Other DBs
NCBI-GeneID: 124386600
NCBI-ProteinID: XP_046706496
LinkDB
Position
5:6904075..6909319
AA seq 183 aa
MSTTTQRKRRTSSTACSRRNSKRSRMQMSQASVETIDVLEGTRLSSEDVVDLTCEGSEPA
VVDLTNNDSVVLLDDGTQSRRMQGTESYVLSSDDEEEPSQSLNPALLSSLHASARARSTP
GAVSCPVCMDAYTEIIESGRLMVSTKCGHLFCSQCIRDSLARAHNCPTCRKKLTYKQYHP
IYI
NT seq 552 nt   +upstreamnt  +downstreamnt
atgagcaccacgactcagaggaagagacgaacaagttccactgcatgttccagacgaaac
agcaaaagaagtaggatgcagatgtctcaggcctcagtggaaaccattgacgttctagaa
ggcaccaggttaagcagtgaagatgtagtagatttaacctgtgaaggatcagagccagct
gtggttgatcttacaaacaacgattcggttgtgcttttggatgatggtacacagagcaga
cgtatgcagggcactgaaagttacgtgctgagcagcgatgacgaggaagagccaagtcaa
agtcttaatccagctcttctgtcatcgctacacgcgagcgcaagagccaggtctacgcct
ggagcggttagttgccctgtatgcatggatgcttacacagagatcattgagagcggaagg
ctcatggtctccaccaagtgtggccacctgttctgcagccagtgcatccgtgactccctc
gcccgggctcacaactgcccaacatgcaggaagaaacttacttataagcagtatcaccct
atctatatctga

DBGET integrated database retrieval system