Silurus meridionalis (southern catfish): 124386635
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Entry
124386635 CDS
T08004
Symbol
si:ch211-274f20.2
Name
(RefSeq) calnexin
KO
K08054
calnexin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04141
Protein processing in endoplasmic reticulum
smeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124386635 (si:ch211-274f20.2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124386635 (si:ch211-274f20.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smeo03110
]
124386635 (si:ch211-274f20.2)
04131 Membrane trafficking [BR:
smeo04131
]
124386635 (si:ch211-274f20.2)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
smeo04091
]
124386635 (si:ch211-274f20.2)
Chaperones and folding catalysts [BR:
smeo03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
124386635 (si:ch211-274f20.2)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
124386635 (si:ch211-274f20.2)
Autophagy
ER-phagy
Other ER-phagy associated proteins
124386635 (si:ch211-274f20.2)
Lectins [BR:
smeo04091
]
L-type lectins
124386635 (si:ch211-274f20.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
124386635
NCBI-ProteinID:
XP_046706571
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All DBs
Position
5:9851534..9864973
Genome browser
AA seq
526 aa
AA seq
DB search
MLIRQGALIAFCFCSTLTVSREEQSIHRPDTSPNQAYFAETFDTSPLDRKWVLSQSLKEA
EFNIYKYDGEWLLEESKNRASPGNKGLVLKSPGRHHAISAYLSTVYHFNEKPLCLQYEVF
FQNGIECGGGYIKLLSHSDDLQLSQFNDATPYSIMFGPDKCGSMYKVHFIFNHRNPLTGS
YEEKHARQPKTDLSDYFTDHSPHLYTLNLYPDNTFEILIDQTLINNGSLLEDMDPPVMPP
REIEDPSDTKPLNWDDRRYIPDPTITKPHDWDEEAPPHIADPTVQKPIGWIEDEEPFVPD
PEAQAPNDWSVEMDGEWEAPLIANPACSHAVGCGPWKPPMVANPAYKGKWKSPKIENPNY
QGKWKPRMIPNPAYFEDTQPFRMSPVSAVGFELWSLTGDVLFDNILLCDDPVITRRWTEE
TWGQRQTHGVVERLLFATGKRPWLWGVYIFTVGLPIILFVSFMWPDKRFGPSDQEYYYKK
SDEPQPDGSEDPEDHMSFSEYGSNNSTDLRKREVNKAQKKSDLELK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgctcattagacagggggcgcttattgctttctgtttctgttcaactctgaccgtaagc
agggaggagcagagcattcacagacctgacaccagtccaaaccaagcatattttgcagaa
acatttgacacaagtccattagatagaaaatgggtcctttcccaatcactgaaagaagca
gagttcaacatttataaatatgatggagaatggcttttagaggagtccaagaatcgagca
tcaccaggaaataaaggccttgtccttaagtctcctggccggcaccatgcaatttctgct
tacctaagcacagtgtaccacttcaatgaaaaacctctgtgtctacagtatgaagttttc
ttccaaaatgggattgagtgtggaggaggctacataaagttgctgtctcattcagatgac
ctacaattgagtcagtttaatgatgccacaccatacagcattatgtttggtccagacaaa
tgtggaagtatgtacaaagtgcatttcattttcaaccaccggaaccccctgacagggagc
tatgaggagaaacatgctcggcagcctaagactgacctgagcgactatttcactgaccac
agccctcatctttacactctcaatttgtatcctgacaacacatttgaaattctcatcgac
caaacattgatcaataacggcagtcttctagaggacatggatccaccagtgatgcctcct
cgtgagatagaggaccccagtgatactaaacccttaaactgggacgacaggcgttatatt
ccagatcctaccatcacaaaaccccatgattgggacgaagaagctcctccacatattgct
gaccccactgtgcagaaacctattggctggatagaagatgaagagccctttgtcccagac
ccagaggctcaggctccaaatgactggtcagtggagatggatggagaatgggaagctcct
ctcattgctaaccctgcctgctcccatgctgtcggctgtgggccgtggaagcctcccatg
gtggcgaacccagcatacaaagggaaatggaagtcacctaagatagaaaacccaaattat
caggggaaatggaagccacgaatgatccctaacccagcttactttgaggacactcaacca
ttcagaatgagtcctgtgtctgcagtaggctttgagctttggtcccttactggtgatgtg
ctgtttgacaacatcttgctttgtgatgaccctgtgatcaccagacgttggacagaggaa
acctggggacaaaggcaaacacatggagttgtggagcggttactgtttgccacaggaaag
cgtccctggctctggggtgtgtacatcttcacagtgggtcttcccatcatcctttttgtc
agtttcatgtggcctgataagcgatttggcccctcggatcaggaatattactacaagaaa
agtgatgagcctcagccagacggttcagaggatccagaggaccacatgagtttctctgag
tatggatccaacaactctactgatctgagaaaacgggaggtcaacaaagcacagaaaaag
tcagatctggagttaaagtga
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