KEGG   Silurus meridionalis (southern catfish): 124386635
Entry
124386635         CDS       T08004                                 
Symbol
si:ch211-274f20.2
Name
(RefSeq) calnexin
  KO
K08054  calnexin
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04141  Protein processing in endoplasmic reticulum
smeo04145  Phagosome
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124386635 (si:ch211-274f20.2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124386635 (si:ch211-274f20.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:smeo03110]
    124386635 (si:ch211-274f20.2)
   04131 Membrane trafficking [BR:smeo04131]
    124386635 (si:ch211-274f20.2)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:smeo04091]
    124386635 (si:ch211-274f20.2)
Chaperones and folding catalysts [BR:smeo03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   124386635 (si:ch211-274f20.2)
Membrane trafficking [BR:smeo04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    124386635 (si:ch211-274f20.2)
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    124386635 (si:ch211-274f20.2)
Lectins [BR:smeo04091]
 L-type lectins
  124386635 (si:ch211-274f20.2)
SSDB
Motif
Pfam: Calreticulin
Other DBs
NCBI-GeneID: 124386635
NCBI-ProteinID: XP_046706571
LinkDB
Position
5:9851534..9864973
AA seq 526 aa
MLIRQGALIAFCFCSTLTVSREEQSIHRPDTSPNQAYFAETFDTSPLDRKWVLSQSLKEA
EFNIYKYDGEWLLEESKNRASPGNKGLVLKSPGRHHAISAYLSTVYHFNEKPLCLQYEVF
FQNGIECGGGYIKLLSHSDDLQLSQFNDATPYSIMFGPDKCGSMYKVHFIFNHRNPLTGS
YEEKHARQPKTDLSDYFTDHSPHLYTLNLYPDNTFEILIDQTLINNGSLLEDMDPPVMPP
REIEDPSDTKPLNWDDRRYIPDPTITKPHDWDEEAPPHIADPTVQKPIGWIEDEEPFVPD
PEAQAPNDWSVEMDGEWEAPLIANPACSHAVGCGPWKPPMVANPAYKGKWKSPKIENPNY
QGKWKPRMIPNPAYFEDTQPFRMSPVSAVGFELWSLTGDVLFDNILLCDDPVITRRWTEE
TWGQRQTHGVVERLLFATGKRPWLWGVYIFTVGLPIILFVSFMWPDKRFGPSDQEYYYKK
SDEPQPDGSEDPEDHMSFSEYGSNNSTDLRKREVNKAQKKSDLELK
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgctcattagacagggggcgcttattgctttctgtttctgttcaactctgaccgtaagc
agggaggagcagagcattcacagacctgacaccagtccaaaccaagcatattttgcagaa
acatttgacacaagtccattagatagaaaatgggtcctttcccaatcactgaaagaagca
gagttcaacatttataaatatgatggagaatggcttttagaggagtccaagaatcgagca
tcaccaggaaataaaggccttgtccttaagtctcctggccggcaccatgcaatttctgct
tacctaagcacagtgtaccacttcaatgaaaaacctctgtgtctacagtatgaagttttc
ttccaaaatgggattgagtgtggaggaggctacataaagttgctgtctcattcagatgac
ctacaattgagtcagtttaatgatgccacaccatacagcattatgtttggtccagacaaa
tgtggaagtatgtacaaagtgcatttcattttcaaccaccggaaccccctgacagggagc
tatgaggagaaacatgctcggcagcctaagactgacctgagcgactatttcactgaccac
agccctcatctttacactctcaatttgtatcctgacaacacatttgaaattctcatcgac
caaacattgatcaataacggcagtcttctagaggacatggatccaccagtgatgcctcct
cgtgagatagaggaccccagtgatactaaacccttaaactgggacgacaggcgttatatt
ccagatcctaccatcacaaaaccccatgattgggacgaagaagctcctccacatattgct
gaccccactgtgcagaaacctattggctggatagaagatgaagagccctttgtcccagac
ccagaggctcaggctccaaatgactggtcagtggagatggatggagaatgggaagctcct
ctcattgctaaccctgcctgctcccatgctgtcggctgtgggccgtggaagcctcccatg
gtggcgaacccagcatacaaagggaaatggaagtcacctaagatagaaaacccaaattat
caggggaaatggaagccacgaatgatccctaacccagcttactttgaggacactcaacca
ttcagaatgagtcctgtgtctgcagtaggctttgagctttggtcccttactggtgatgtg
ctgtttgacaacatcttgctttgtgatgaccctgtgatcaccagacgttggacagaggaa
acctggggacaaaggcaaacacatggagttgtggagcggttactgtttgccacaggaaag
cgtccctggctctggggtgtgtacatcttcacagtgggtcttcccatcatcctttttgtc
agtttcatgtggcctgataagcgatttggcccctcggatcaggaatattactacaagaaa
agtgatgagcctcagccagacggttcagaggatccagaggaccacatgagtttctctgag
tatggatccaacaactctactgatctgagaaaacgggaggtcaacaaagcacagaaaaag
tcagatctggagttaaagtga

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