Silurus meridionalis (southern catfish): 124386735
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Entry
124386735 CDS
T08004
Symbol
wdr82
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124386735 (wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124386735 (wdr82)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124386735 (wdr82)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124386735 (wdr82)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
124386735 (wdr82)
COMPASS/SET1 complex (yeast)
124386735 (wdr82)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WD_LRWD1
KNTC1_N
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
MinC_C
Motif
Other DBs
NCBI-GeneID:
124386735
NCBI-ProteinID:
XP_046706646
LinkDB
All DBs
Position
1:complement(20010900..20015434)
Genome browser
AA seq
313 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLQYDRSCEWTGLKFSNDGKLILISSNGGTLRLLDAFKGAVLHSFSGYNNSKG
VVXEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaacagacaatgtcctgcggagtttcagggtcgctaaggtttttcgagagaat
tctgacaaaatcaactgctttgacttcagctcgaatggcgagacggtgatatcgagcagc
gacgatgattctatcgtcttatatgactgccaggagggaaaaccgaagcgaaccctctac
agtaaaaagtatggggtggacctcatcagatacacacacgccgccaatacagtcgtctac
agctccaacaagatagacgacactatacggtacttgtcacttcatgacaataagtacatt
cggtactttcctggacataataagagggttgttgcattgtctatgtcacctgttgatgat
acattcatctctggctccttggataaaacaatcaggctgtgggatcttcgctctcctaat
tgtcagggtttaatgcatctacaggggaagccggtgtgttcgtttgatcctgagggtctt
atattcgctgcaggagtcaattcggagatggtcaaactctacgacctgcgctcattcgac
aaaggcccatttgctacattcaagctacagtatgatcgttcatgtgagtggacaggcctc
aagttcagcaacgatggtaaactcatcctgatctccagcaacggtggaactctcaggttg
ctcgatgcgtttaaaggggctgtgctgcattcgttctcgggctacaacaacagcaaaggc
gtggttnctgaagcctccttcaccccagactctcagtttgtcatgattggctctgaggat
gggaaaatccatgtatggaatgctgaaagtggaatgaaggtagcactgttggatgggaaa
cacaccgggcctgtcacctgcctacagtttaatccaaaatttatgacctttgccagcgcc
tgttctaacatggcattctggctaccaacaatcgatgactaa
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integrated database retrieval system
