Silurus meridionalis (southern catfish): 124386906
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Entry
124386906 CDS
T08004
Symbol
dysf
Name
(RefSeq) dysferlin
KO
K18261
dysferlin
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124386906 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124386906 (dysf)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Others
Ferlins
124386906 (dysf)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124386906 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Pex24p
CEP76-C2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
124386906
NCBI-ProteinID:
XP_046706907
LinkDB
All DBs
Position
6:complement(14919480..14995694)
Genome browser
AA seq
2125 aa
AA seq
DB search
MLRCVLQRATHLKNVEKGERQSDPLASITFRGTKKKTKVVKNNVNPVWNEGFEWDLKGVP
LDSTAELHVVVKDHEKMGRNRFLGECRISLRDLLNSPSLTATFTVSLVDNKRNNTGATVT
LQVSYIPPPGMAPIFQHPSLPETPHNTVELDTVTVFSLDTMGDEDTESMLMVEVAEEPEP
VPGPQGQENGDPHTPPKRAPPAFTHGMKKKKQQSNKAPLSNKPQDLQVRVRIIEGRQLPG
INIKPVVKVTVGGQTKRTCIKKGNNPFFDETFFLNFFETPKDLFDEPIFITVFDSKSLRT
DSVIGEFKLDVGMVYNEHKHAILRKWLLLADPDDLCAGARGYLKVSLIVLAAGDEAPTEK
DGVQEREDIESNLLRPAGLTLRGATFTLKVFRAEDLPQMDDAFMDGMKQFLGFESNRKNL
VDPLVEVNFAGKTMCSKILEKNANPQWNQSLMLPIRFPSMCEKMRIRILDWDRASHNDVI
GTAYLSMSKISAPGGEIEDDLPPRTVQIAIDDSLGFLPTFGPCYVNMYGSPREFSAFSDP
YEALNLGKGEGVAYRGRLLLELTTKLSERVEQKVEDIYPDDLLVVEKFMRKRKYSLFAAF
YSATLLQDVDDAIQFEVSIGNYGNKFDYTCLPLASTTQFSRAVFDGCHYYYLPWGNVKPV
VVLSSEWEDISPRMEALNMMLSITEHLETNLNLVQLELQAGGDQDRLEQRVVKLLDDLIA
DCREELPELDEWPCVTPLDKALRRLRKVNLRQIEQAALALKHGQETELSTVLEQAEDWAM
RLYSLTEEPQNSLPDILIWMLQGDKRVAYHRIPAHEVLFSQGYCGKHCGQLQTVFMKFPQ
GGSKDSKIPAQLRVKVWFGLTADVKHFNQFSEGKLSVFAETYENQTKLALVGNWGTTGLT
YPKFSDITGRIKLPKESFKPSPGWSWAGDWYINPEKTLLYDVDAGHMTFMEEVFENQMRL
PGGQWIGMPEGYTDVNGEKAVPRDDIECPLGWVWEDVEWSKDLKRAVDDQGWEYGITIPP
DRRPKSWVPAEKMYHTNRRRRWIRLRRRDLQKMEALRKQCPDESEREGWEYASLFGWKFH
LKQRKTDSFRRRRWRCRMEPLEKTGPAAIFALECSLQSNVTDDKNDDKSLTATFGVNRPN
ISCFFDSGTRYHLRCYLYQARDLLAMDKDSFSDPFAIVSFLHQSQKTVTLRNTLNPTWDQ
TLIFYEVEIFGDPNVTDKSPPNIVVELYDQDTYGADEFMGRSICQPSVVSSPRLAWYPIL
KGDKAAGELLAAFELIRRDKPAVHHIPGQEAEILYHSHIMDELIFSAAFPETLQQWPEDS
DLPLPPPQREQNIFMVPHGIKPVLERTAIEILAWGLRNLKSFQLSSVTSPSLQVECGGCM
VQSCVIRNTKKNPNFEVNTLFVDMRLPREELYMPPLVIKVIDNRQFGRKPVVGQCTIRSL
EDFRCLPKNQDEEPTEDELEPIPHTPRDDILIDIDDNEPLIPGQLADGTSSAIINISPSR
SSLHMMLWEDEFMDWWSKFYASTGERKKCGTYLEKGLDMLQVYDTELEKIDGFEGLADFC
QTFKLYRGRTQESKNDDPSIVGEFKGMFKIYPLPESPSASLPPRQFCLLPPNGIEDCLVR
VYIIQAYGLQPKDPNGKCDPYVKITLGKKSVNDHDNYIPCTLDPVFGKMYELTCSLPLEK
DLRITLYDYDMMSKDEKIGETVIDLENRFLSRYSARCGLPESYCVSGVNQWRDQMKPTQL
LHRFSQRRNYKLPVYMHDRVIFRGHEYTTADLVDEAKPANPHLGPLQERLALLVLRRQGL
VPEHVETRALYSPMQPDIEQGRLQLWVDLFPKSMGPPGPPFNITPRKAKKFFLRCIIWNT
SDVILDDVSVTGERMSDIYVKGWMHGHDGNKQKTDVHYRSLGGEGNFNWRLLFPFHYLPA
EQLCTIDKKEHFWSLDKAETKIPPKLTIQIWDNDKFSFDDYLGCLEMDLNHMLKPAKSPE
KCGLELLSQPQDKLVSLFEQKTVKGWWPCVCDRQGEKILAGKVEMTLEIVSEQEQEERPA
GLGREEPNMNPRLEEPQRPETSFLWFSSPYKTLRFIVWRRFKWLILLLIILFFILLFLGV
FLYAFPNYFAMRLVGPFSGIGNGKQ
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtgtgtgctccagagagcgactcacctgaagaatgtggagaaaggggagcgg
caaagtgacccgctagccagcatcacattcagagggactaaaaagaagaccaaagttgtt
aaaaacaatgtcaacccagtctggaatgagggttttgagtgggacctaaaaggagtaccc
ctagactcaacagcagagctgcatgtggttgtgaaggaccatgaaaaaatgggaaggaac
cgatttctgggggaatgtcggatttctttaagggatttactcaactccccaagcctaaca
gctaccttcactgtatccttagtggacaacaagagaaacaacaccggggccacagtgact
ctgcaggtttcctacatccctcctccaggaatggctcccatttttcaacacccatcattg
ccagagactccgcataatactgtggagctggacactgtcacagtgttctcattggacact
atgggagatgaagacacagagagcatgctcatggttgaggttgcagaggagcccgaacct
gttccaggaccacaaggccaggagaatggggatcctcatacaccaccgaaaagagctcct
ccagcatttacacatggcatgaagaaaaaaaaacagcaaagcaacaaagccccactttcc
aacaaaccccaggacctccaggtacgggtgcggatcatcgagggaaggcaactgcccggc
attaatattaagcctgttgtcaaagtaactgtggggggccagacaaaaagaacatgcatc
aagaaaggcaacaatccgttttttgatgagactttctttctaaacttcttcgagacacca
aaagatctgtttgatgaacctatatttatcacagtctttgactccaagtctcttcgaaca
gactctgttattggagaatttaagctggatgttggcatggtgtataacgaacacaaacat
gctattctcaggaagtggctgttgctggctgaccctgatgatctttgtgctggagccaga
gggtatctgaaggtcagccttatagttctggctgcaggtgatgaagcaccgactgaaaaa
gatggtgttcaggagagggaggacattgagtcgaacctgctgagaccagcagggctcaca
ttaagaggagccaccttcactctaaaagtgtttcgtgcagaggacctgcctcagatggat
gatgcatttatggatggcatgaagcaatttttgggttttgagtcaaaccgaaaaaacctg
gtggatccattagtggaagtcaacttcgctggcaaaacgatgtgcagtaaaatattggag
aagaacgccaacccacagtggaaccaaagccttatgctacctatcagatttccatctatg
tgtgagaagatgaggatacgcattttagattgggatcgagcaagccacaatgatgtcatt
ggcactgcatacctgagtatgtcaaagatttctgctccaggaggggaaatagaagatgac
ttgccccccaggaccgtccaaattgccattgatgatagcctgggcttcctgccaacgttt
ggcccctgttatgtgaatatgtatggaagtccaagagagttcagtgccttctccgacccc
tatgaagctcttaaccttggaaagggtgaaggtgtagcgtatcgtggtcgtttgctcttg
gagctcaccactaaacttagtgaacgagtggagcaaaaagtggaagacatttaccccgat
gaccttctggtggtagagaaatttatgcggaagagaaagtactctctgtttgctgctttt
tactcggccacacttcttcaggatgtggatgatgcaatccagtttgaggtcagcatcggt
aactatggcaacaagtttgactacacctgcctgcctctggcctccacaacacagtttagc
cgagctgtgtttgatggttgtcactactattacctgccctggggaaatgtgaagcctgtg
gtggtattgtcatcagagtgggaagatatcagcccccgcatggaggctcttaacatgatg
ctgagtatcacagaacatctggaaacaaacctgaatcttgtacagttggagcttcaagca
ggtggtgaccaggaccgactggagcagagggtggttaaattacttgatgatctcattgca
gactgcagggaagagctgcctgagctggatgaatggccatgtgtgacccctctggacaaa
gctctgaggcgtttgcgtaaggtgaacctgaggcagattgagcaggccgcattagcgtta
aaacatggccaggagacagagctaagcacagtgctggagcaggctgaggactgggccatg
agactgtactcactcactgaagagccccaaaacagtctgccagacatattgatctggatg
cttcagggggacaaaagggtggcttaccacagaatcccagcccatgaggtgctcttctct
cagggttactgtggcaaacactgtggtcagctacaaactgtcttcatgaagttcccacag
ggtggtagcaaagacagtaagatcccagcacagcttcgagtgaaggtctggttcggttta
actgctgatgtcaagcatttcaaccagttttcagaggggaaactgtctgtgtttgcagag
acatatgagaaccagactaaattagccctggtgggaaactggggcactacagggctcact
taccccaagttcagtgacattaccgggagaataaagctgcccaaggagagttttaaaccc
tcgccaggctggtcatgggctggagactggtacatcaacccagagaaaaccttgttatat
gatgtggatgctggacacatgacttttatggaggaagtgtttgagaatcagatgcggctg
ccgggaggacaatggatcggcatgccagaaggttacacagatgtgaatggtgagaaagca
gtgccaagagatgatattgagtgccctcttggctgggtgtgggaagacgtggaatggagc
aaagatttaaaacgggctgtagatgatcaaggatgggagtatggcattaccatccctcct
gaccgtcgacctaaatcttgggttccggctgagaaaatgtaccacaccaatcgccggcgt
cgctggatccgccttcgtcgccgagacctgcagaaaatggaagcactcagaaagcagtgt
ccagatgagtctgaacgggagggttgggagtatgcctctctctttggctggaagttccac
cttaagcaaaggaagacagattcgttccgccgtcgccgctggcgttgccgcatggagcct
ctggagaagactggacctgcggccatctttgccctagagtgctcactgcagagcaacgtg
actgatgacaaaaacgatgataagtctctcacagcaacctttggtgtcaatcgtcccaat
atctcatgcttctttgatagtggaacacgctaccatttgcgctgctatctgtatcaggct
agagacctgctggctatggataaagacagtttctcagatcccttcgccattgtgtcattc
ctgcaccagagccagaagacagtgaccttgaggaacacacttaaccccacttgggatcag
actcttatcttctatgaggtggagatcttcggagatcctaacgtgacagataaaagtcca
ccaaacattgtggtggagctctacgatcaagacacttatggggcagatgagtttatgggg
cgcagtatatgccagccctctgtggtctcctctccacgtctggcatggtatcccatccta
aaaggtgacaaagcagctggtgaactacttgctgcatttgagctgatccgcagagataag
cctgcagttcatcatatccctggtcaagaggctgaaattctataccattctcatatcatg
gatgagcttattttttcggcggccttccctgagactttgcagcaatggccagaagactca
gatttgccattgccgcctccccagagagagcaaaatatcttcatggtgccacatggcatc
aaacctgttctagagcggaccgctattgagatcctggcatggggattacgtaacctgaag
agcttccagctgtccagtgtgacctcccctagcttgcaggtcgagtgtggaggttgtatg
gtgcagtcctgtgtcattcgcaacactaagaagaatcccaactttgaagttaacacactc
tttgttgacatgcggctgcccagagaggaactctacatgcctccactggtgatcaaggtg
attgacaatcggcagtttgggaggaagcccgtggtgggacaatgtaccattcgttctctg
gaggatttccgctgcctgcctaagaaccaggatgaagaacctacagaagatgagctggaa
cccattcctcacacaccaagagatgacatactgattgacattgatgacaatgaacctctt
attcctggacagcttgcagatggcaccagttctgctatcattaacatttcgccttctcgc
tccagcctccatatgatgctttgggaggatgaatttatggattggtggagtaagttctat
gcctcgacaggagagagaaagaagtgtggaacctatctggagaaaggccttgacatgcta
caggtgtatgacactgaactggaaaaaattgacggctttgaggggctggcagatttctgt
cagacgttcaagctttatcgcggacgcacacaggagagtaaaaatgatgatccttctata
gtcggagagttcaagggaatgttcaagatctacccattacctgaaagcccatctgcctct
ttgcccccacgccagttctgtcttcttcctcctaacggcatagaagattgcttagtccgg
gtatatattattcaggcttatggtctgcagcccaaagatcccaatggcaagtgtgaccca
tacgtcaagattacattaggaaagaaatcagtaaacgatcatgataactacataccctgt
accttggacccagtttttggaaagatgtatgaactgacatgctccctgcctttggagaaa
gaccttaggatcacactgtatgattatgacatgatgtctaaagatgaaaagattggcgag
accgttattgacctggagaaccgcttcctgtcccgttacagtgcccgctgtggccttccc
gagtcctattgtgtgtctggagtgaaccagtggagagatcaaatgaaacccactcagctg
ctccatcgttttagtcagaggagaaactacaagctgcctgtctacatgcacgacagagtg
atttttagaggccacgagtataccactgcggacttggtagatgaggcaaagccagcaaat
cctcacctcgggccactgcaggagcggctggctctgctggtgctgaggagacaaggcctt
gtgcctgaacacgtggagactagggctctatacagcccaatgcaacccgacatagaacag
gggcggttacagttatgggtggatctcttccctaaatctatgggtcctccaggaccacct
ttcaacatcaccccacgcaaagcaaagaagttctttctacgctgcataatatggaacaca
agcgatgtgatactcgatgatgtcagtgttacaggcgagaggatgagtgacatttatgta
aaaggatggatgcatggacatgatgggaacaagcagaaaactgatgtacattatcgctcg
ctgggtggtgagggtaactttaactggaggctcctctttcccttccattacttacctgct
gaacaactctgcactattgacaaaaaggagcatttctggagtttggataaggctgaaaca
aagattcctcctaaactcaccattcagatctgggacaatgacaagttctcctttgacgat
taccttggttgtttggaaatggatttgaatcacatgctgaagccagcgaagtctcctgag
aaatgtggtctagagctgctctctcagccccaggacaagctggtgtctctctttgaacaa
aagaccgtcaagggctggtggccttgtgtgtgtgacagacaaggagagaagatcttagca
ggtaaggttgagatgacactggagattgtgtcagagcaggaacaggaagaaaggcctgcg
ggtctgggcagagaagagcctaacatgaaccctcggttggaagagccacaacgtccagaa
acctccttcctgtggttctcctctccgtataaaactctaaggttcatagtatggaggaga
tttaaatggctcatactgttactgatcattcttttcttcatcctgctcttcctgggagtc
tttctgtatgctttccctaactattttgctatgaggctcgtgggccccttcagtggaata
ggaaatgggaaacaataa
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