Silurus meridionalis (southern catfish): 124386907
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Entry
124386907 CDS
T08004
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 5-like
Organism
smeo
Silurus meridionalis (southern catfish)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
Ig_4
V-set
Ig_5
DUF5385
DUF4834
PFF1_TM
Cadherin_C_2
SIT
CLN3
TMEM154
Motif
Other DBs
NCBI-GeneID:
124386907
NCBI-ProteinID:
XP_046706908
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Position
6:33646791..34050434
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AA seq
825 aa
AA seq
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MELSPLPVILLLVSLLPVAHAQAKPKPTLRSFPWSLINGEDTITLSCELQDWTGWEFFWY
RNSHILSNVATDTNTFSVNVINAGETVYQCSARWRSDHRYYTELSDPVKITAKEKPKLTL
KVNPQSSIYTGDTITLSCELQGTGWEFFWYRNSQLERNELRYSNTLSVRVDYAGETVYQC
RASKKIYNIYNNYNYVYTRLSDSVTITAKERPKPVASINPDKQVFSGDTVTLRCEIQDES
VSRWQYSWYKDASLSPVSSVQMYTISSVEVTHTGKYTCKGRESGGSRSSHLSDAVTLTVS
VKPKPVASINPDKQVFSGDTVTLRCEIQDESVSRWQYSWYKDASLSPVSSVQMYRISSVE
VTHTGKYTCKGRESGGSRSSHLSDAVTLTVSERPQAVLSVSPRNWLTEGDSVTRSCEVTD
SSTHWTFSWYTVVPYRDGVTAIQNTQGFIVYVELLLDSSRGCGGSYTLSPSALHHTGVYV
CRGKRGEPAFYTLYSNPQPLWISGESPPASLIISPSRTQHFTRDSLSLSCEDQSNSTGWT
VRRYTDSEEVLDCSRWRLVTGSTCYIRFLSTSYTGVYWCESESGENSNPVNITVHGGDVI
LESPVHPVTEGHPLTLHCLYRNANPSNLRADFYKDGSVIQNQTTGEMIIHKVSKSDEGFY
HCKHPERGESLRSWISVRRSVSISGSRPSGETVGVAVGLSLSFLFIILMILMILLWFYKL
KKEKQQKSSQISEQNQRRSGAEDSQSGHKPLQTGEAAAQSSEDTYTQVMKKKKRSRKNGA
DAQLGMNDVTYAEVQLKPMKKVKRAQEKNRVGDDTVYSELDHNMK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggagctcagtccactgcctgtgatactcttgctggtttcacttttaccagtggctcac
gctcaagcaaaacccaaaccaactttgagatcatttccttggagcctcatcaatggtgaa
gacaccatcactctgagctgtgagctgcaggactggactggatgggagttcttctggtac
agaaattcacatatactgagcaatgtagcgacggataccaacacattcagtgtgaatgtc
attaatgcaggagaaacagtgtatcagtgttcagcacgctggagaagtgaccacagatac
tacacagagctcagtgatcctgtcaagatcacagcaaaagaaaaacccaaactgactttg
aaagtgaatcctcagagctccatctacactggagacaccatcactctgagctgtgagctg
caggggactggatgggagtttttctggtacagaaactcacagcttgagaggaatgaactc
agatattccaacacactcagtgtaagagttgattacgcaggagaaacagtgtatcagtgt
cgtgcaagcaagaaaatctacaacatctataacaactacaactacgtctacacaagactc
agtgattctgtcaccattacagcaaaagaaagacccaaaccagtggcatctataaatcct
gataaacaggtgttcagtggagacactgtcactctgagatgtgagatacaggatgaaagt
gtatctaggtggcagtacagctggtataaagatgcttcactcagtcctgtcagtagtgta
cagatgtacacaatcagtagtgttgaagtgacacacacaggtaaatacacctgtaaagga
agagagagtggaggctcacgttcctcacacctcagtgatgctgttacactgactgtatca
gtgaaacccaaaccagtggcatctataaatcctgataaacaggtgttcagtggagacact
gtcactctgagatgtgagatacaggatgaaagtgtatctaggtggcagtacagctggtat
aaagatgcttcactcagtcctgtcagtagtgtacagatgtacagaatcagtagtgttgaa
gtgacacacacaggtaaatacacctgtaaaggaagagagagtggaggctcacgttcctca
cacctcagtgatgctgttacactgactgtatcagagagaccacaggcagtactgagtgta
tctccacggaactggctgactgaaggagactcagtgactcgaagctgtgaggttacagac
tcctctacacactggacattcagctggtacacagttgttccctacagagacggtgtaact
gcaatacaaaatactcaaggctttatcgtgtatgtggagcttcttttagacagcagcaga
ggatgtggaggctcctacactctcagtccttctgctcttcatcacacaggagtttatgtg
tgtagaggaaagagaggagaaccagccttttacacactgtacagcaatccacagcctcta
tggatctctggtgaatctcctccagcgtctctgatcatcagtcccagcagaactcaacac
tttactcgtgactctctctcactgagctgtgaggaccagagtaactctactggatggaca
gtgagacgatacacagacagtgaagaagtgttagattgttcacggtggagattagttaca
ggatctacatgttacatcagattcctctccacatcctacactggagtttactggtgtgag
tctgaatctggagaaaacagtaatcctgtcaacatcacagttcatggtggtgatgtgatt
ctggagagtcctgtccatcctgtgactgagggacatcctctgactctacactgtttatat
cgtaacgcaaatccctcgaacctacgagctgatttctataaagatggatcagtcatccag
aaccagactacaggagagatgatcatccataaagtctcaaagtcagatgaaggtttctac
cactgtaaacacccagagagaggagagtcactgagaagctggatctcagtcagacgctct
gtctcaatctcaggttctagacccagtggtgaaacagtgggagtggctgtgggactgagt
ttgtcctttttgttcatcattttgatgatattaatgatcctgctgtggttctacaaattg
aagaaagaaaagcagcagaaatccagtcagatatcagagcagaatcagaggcgatcagga
gctgaagactctcagtcaggacacaaaccacttcagactggtgaagctgcagctcagagc
agtgaagacacttacacacaggtcatgaagaagaagaagagaagcaggaagaatggtgct
gatgctcaactcggcatgaatgatgtgacttacgctgaggttcaactaaaacctatgaaa
aaagtgaagagagcacaagaaaagaacagagttggtgatgatactgtttactcagagctg
gatcataacatgaagtga
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